RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TREX1Q9NSU2 369 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 SYBUQ9NX95 663 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 EIF2B4Q9UI10 523 aaKnown RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 SOX13Q9UN79 622 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
SF3B3-206ENST00000565990 PKP3Q9Y446 797 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 TEX264Q9Y6I9 313 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 SLCO1B1Q9Y6L6 691 aa12.56□□□□□ -0.4
SF3B3-206ENST00000565990 DMDP11532 3685 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 FPGTO14772 594 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 STX7O15400 261 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 BUD23O43709 281 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 SOD1P00441 154 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PYGLP06737 847 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 GSTA1P08263 222 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 ITPKAP23677 461 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 AKT2P31751 481 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 HADHAP40939 763 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 DHPSP49366 369 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 ARL4CP56559 192 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PFN3P60673 137 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 YPEL5P62699 121 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 CRADDP78560 199 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 ITIH4Q14624 930 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 INPP5AQ14642 412 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 STAT4Q14765 748 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 HIF1AQ16665 826 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 CCDC38Q502W7 563 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 GKAP1Q5VSY0 366 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 LYSMD4Q5XG99 296 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 IQCHQ86VS3 1027 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 SYT12Q8IV01 421 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 CACNA2D3Q8IZS8 1091 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PELI3Q8N2H9 469 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 RIBC1Q8N443 379 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 MFSD2AQ8NA29 543 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PLA2G15Q8NCC3 412 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PPHLN1Q8NEY8 458 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 SCAMP4Q969E2 229 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 AP2M1Q96CW1 435 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 SERAC1Q96JX3 654 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 EBNA1BP2Q99848 306 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 TACO1Q9BSH4 297 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 RIOK2Q9BVS4 552 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 TEX101Q9BY14 249 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PPCSQ9HAB8 311 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 BPIFA1Q9NP55 256 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 GPR27Q9NS67 375 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 CNOT6Q9ULM6 557 aaKnown RBP12.55□□□□□ -0.4
SF3B3-206ENST00000565990 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 RALGAPA1Q6GYQ0 2036 aa12.55□□□□□ -0.4
SF3B3-206ENST00000565990 A0A1B0GTW7 788 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 POM121BA6NF01 834 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 MEI4A8MW99 385 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 PRR5-ARHGAP8B1AHC4 643 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 VILLO15195 856 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 BCAT2O15382 392 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-206ENST00000565990 RGS16O15492 202 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-206ENST00000565990 EPN2O95208 641 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 TSHRP16473 764 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 NMBRP28336 390 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 SPAM1P38567 509 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 MAGOHP61326 146 aaKnown RBP12.54□□□□□ -0.4
SF3B3-206ENST00000565990 OVGP1Q12889 678 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 MTM1Q13496 603 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 PEX6Q13608 980 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 IRF4Q15306 451 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 ANKRD20A4Q4UJ75 823 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 PLA2G2CQ5R387 149 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
SF3B3-206ENST00000565990 LAIR1Q6GTX8 287 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 ADAMTSL4Q6UY14 1074 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 GCNT7Q6ZNI0 430 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 CCDC121Q6ZUS5 278 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 TRAM1L1Q8N609 369 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 ANKS4BQ8N8V4 417 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 OR13C4Q8NGS5 318 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 MFSD3Q96ES6 412 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 CHMP6Q96FZ7 201 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 DNAJC1Q96KC8 554 aaKnown RBP12.54□□□□□ -0.4
SF3B3-206ENST00000565990 FCRL3Q96P31 734 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-206ENST00000565990 VPS35Q96QK1 796 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 AGAP2Q99490 1192 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 ZSCAN5AQ9BUG6 496 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 EPB41L4BQ9H329 900 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 SLC2A6Q9UGQ3 507 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 CD84Q9UIB8 345 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 APPL1Q9UKG1 709 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 ACTL7BQ9Y614 415 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 FRYLO94915 3013 aa12.54□□□□□ -0.4
SF3B3-206ENST00000565990 MYO15AQ9UKN7 3530 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 TP53BP1Q12888 1972 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-206ENST00000565990 GLYATL1P3A0A0U1RQE8 302 aa12.53□□□□□ -0.4
SF3B3-206ENST00000565990 ZCWPW2A0A1B0GU75 182 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms