RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SERPINA9Q86WD7 417 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ACVR1CQ8NER5 493 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ACMSDQ8TDX5 336 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 LPGAT1Q92604 370 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SCAMP4Q969E2 229 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 DTD2Q96FN9 168 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 MRGPRX1Q96LB2 322 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ASB2Q96Q27 587 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 FOXQ1Q9C009 403 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 CAB39LQ9H9S4 337 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SSU72Q9NP77 194 aaKnown RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 POLMQ9NP87 494 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SPAG7O75391 227 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ACADMP11310 421 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 GM2AP17900 193 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 NDUFV2P19404 249 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SAT1P21673 171 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 CCNFP41002 786 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 POU4F1Q01851 419 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SLC18A2Q05940 514 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SFSWAPQ12872 951 aaKnown RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 DBN1Q16643 649 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ZNF284Q2VY69 593 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ATP13A5Q4VNC0 1218 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 RBM20Q5T481 1227 aaKnown RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 KIAA1324Q6UXG2 1013 aaKnown RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SH2D5Q6ZV89 423 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 CMC1Q7Z7K0 106 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SLC41A1Q8IVJ1 513 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 NXPE1Q8N323 547 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 FLCNQ8NFG4 579 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 DTX3LQ8TDB6 740 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 FAM131CQ96AQ9 280 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ULK4Q96C45 1275 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 NDNQ99608 321 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 RIOK2Q9BVS4 552 aaKnown RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 ABCG8Q9H221 673 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 PCMTD2Q9NV79 361 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 SMG5Q9UPR3 1016 aaKnown RBP18.63■□□□□ 0.57
COMMD4-213ENST00000565834 COQ6Q9Y2Z9 468 aa18.63■□□□□ 0.57
COMMD4-213ENST00000565834 TMEM120BA0PK00 339 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 AGAP14A8MT82 685 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 ATG13O75143 517 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 RECQL5O94762 991 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-213ENST00000565834 PCDH8O95206 1070 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 ACRV1P26436 265 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 PTGER3P43115 390 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 MAGEA12P43365 314 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 ATP1A2P50993 1020 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 DGKEP52429 567 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 SLC12A2P55011 1212 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 HENMT1Q5T8I9 393 aaKnown RBP18.62■□□□□ 0.57
COMMD4-213ENST00000565834 USP30Q70CQ3 517 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 SYT13Q7L8C5 426 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 KBTBD6Q86V97 674 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 GJD3Q8N144 294 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 TRAM1L1Q8N609 369 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 BANPQ8N9N5 519 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 AP2M1Q96CW1 435 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 NUS1Q96E22 293 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 APOPT1Q96IL0 206 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 ZSCAN5AQ9BUG6 496 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 CCDC68Q9H2F9 335 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 CNOT10Q9H9A5 744 aaKnown RBP18.62■□□□□ 0.57
COMMD4-213ENST00000565834 TBC1D17Q9HA65 648 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 MUTYHQ9UIF7 546 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 FZD4Q9ULV1 537 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 NCKAP1Q9Y2A7 1128 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 NUMA1Q14980 2115 aa18.62■□□□□ 0.57
COMMD4-213ENST00000565834 PRPF4O43172 522 aaKnown RBP eCLIP18.61■□□□□ 0.572e-7■■■■■ 39.9
COMMD4-213ENST00000565834 MPOP05164 745 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 GABRG2P18507 467 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 CA5AP35218 305 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 CREB5Q02930 508 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 FZD5Q13467 585 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 HECTD2Q5U5R9 776 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 FAM45BPQ6NSW5 357 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 ZNF765Q7L2R6 523 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 OR14C36Q8NHC7 312 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 FAM45AQ8TCE6 357 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 TSPAN17Q96FV3 270 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 CABS1Q96KC9 395 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 VWA7Q9Y334 891 aa18.61■□□□□ 0.57
COMMD4-213ENST00000565834 FAM47DPA6NHR8 397 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 COPEO14579 308 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 PLRG1O43660 514 aaKnown RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 TYROBPO43914 113 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 OR1I1O60431 355 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 STMN1P16949 149 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ZNF7P17097 686 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 FMO4P31512 558 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 GYS2P54840 703 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 TAS2R39P59534 338 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 RAB10P61026 200 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 PPARDQ03181 441 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 PDE1CQ14123 709 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ZNF549Q6P9A3 640 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 TRIM67Q6ZTA4 783 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 RAPH1Q70E73 1250 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms