RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 RFX6Q8HWS3 928 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ZNF843Q8N446 348 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 RCBTB1Q8NDN9 531 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 USP7Q93009 1102 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 RNF25Q96BH1 459 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 AGAP3Q96P47 875 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 OLFM3Q96PB7 478 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CCNL2Q96S94 520 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 FAM83DQ9H4H8 585 aa17.29■□□□□ 0.36
MAP1LC3B-207ENST00000565788 TRBV23OR9-2A0A075B6M9 112 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 IGHV1OR21-1A0A087WYE8 117 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 IGHV5-10-1A0A0J9YXX1 117 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 C9orf172C9J069 976 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 PPP1R12AO14974 1030 aaPredicted RBP17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ZW10O43264 779 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 EFSO43281 561 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 EML2O95834 649 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 LIPCP11150 499 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CCL4P13236 92 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 TNNT1P13805 278 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CSF2RBP32927 897 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 DYNLT1P63172 113 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CFHR1Q03591 330 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 LRP8Q14114 963 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 PDK1Q15118 436 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CLPPQ16740 277 aaPredicted RBP17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 LRRC38Q5VT99 294 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CHST15Q7LFX5 561 aaPredicted RBP17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ZFAND4Q86XD8 727 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ZNF761Q86XN6 746 aaPredicted RBP17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CCHCR1Q8TD31 782 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 SLC37A2Q8TED4 501 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 EID2BQ96D98 161 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 IMP4Q96G21 291 aaKnown RBP17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 WBP1Q96G27 269 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 CCDC74BQ96LY2 380 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 TRIB3Q96RU7 358 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ADGRE3Q9BY15 652 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 BRD8Q9H0E9 1235 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 VPS18Q9P253 973 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ZNHIT2Q9UHR6 403 aa17.28■□□□□ 0.36
MAP1LC3B-207ENST00000565788 PIRTP0C851 137 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 ZFXP17010 805 aaPredicted RBP17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 NOP2P46087 812 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 LIMK2P53671 638 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 PCSK7Q16549 785 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 MFSD7Q6UXD7 560 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 NT5DC3Q86UY8 548 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 RHOT1Q8IXI2 618 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 SEMA4CQ9C0C4 833 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 DDX56Q9NY93 547 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 KCNK4Q9NYG8 393 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 AKAP7Q9P0M2 348 aaPredicted RBP17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 TMEM9Q9P0T7 183 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 SHOC2Q9UQ13 582 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 KCNK6Q9Y257 313 aa17.27■□□□□ 0.36
MAP1LC3B-207ENST00000565788 KALRNO60229 2985 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 RGSL1A5PLK6 1076 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 AKR1B15C9JRZ8 316 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 HGSO14964 777 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SLC4A1P02730 911 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 ACP5P13686 325 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 COMTP21964 271 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 MPSTP25325 297 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SLC1A1P43005 524 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 FASLGP48023 281 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 TBX2Q13207 712 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 LY6DQ14210 128 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 TCEAL1Q15170 157 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 ODF2Q5BJF6 829 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 ALS2CLQ60I27 953 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 CNGA4Q8IV77 575 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SFRP1Q8N474 314 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 OR4D9Q8NGE8 314 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SPATA22Q8NHS9 363 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 TADA1Q96BN2 335 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SLC25A51Q9H1U9 297 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 ZFYVE1Q9HBF4 777 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 ARFGAP3Q9NP61 516 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 TBC1D29Q9UFV1 150 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 INTUQ9ULD6 942 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SDK2Q58EX2 2172 aa17.26■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SPOPO43791 374 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 MT-CYBP00156 380 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 THRAP10827 490 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 CDK18Q07002 472 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SQSTM1Q13501 440 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 TRA2AQ13595 282 aaKnown RBP eCLIP17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 LLGL1Q15334 1064 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 ZNF648Q5T619 568 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 TMC3Q7Z5M5 1100 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 PMEPA1Q969W9 287 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SLC38A3Q99624 504 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 SPATA16Q9BXB7 569 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 CARD9Q9H257 536 aa17.25■□□□□ 0.35
MAP1LC3B-207ENST00000565788 RMI1Q9H9A7 625 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms