RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 MAP9Q49MG5 647 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 PYCR3Q53H96 274 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 NPNTQ6UXI9 565 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 CLEC14AQ86T13 490 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 KCNE4Q8WWG9 221 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 SCAMP4Q969E2 229 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 SLC46A1Q96NT5 459 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 VPS35Q96QK1 796 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 C19orf43Q9BQ61 176 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 SPATA16Q9BXB7 569 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.61■□□□□ 0.25
USB1-211ENST00000565662 AAR2Q9Y312 384 aaKnown RBP16.61■□□□□ 0.25
USB1-211ENST00000565662 ZNF711Q9Y462 761 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 ARHGEF17Q96PE2 2063 aaPredicted RBP16.61■□□□□ 0.25
USB1-211ENST00000565662 KIR2DS5A0A0G2JLQ3 304 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 A0A0G2JNG1 304 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 KLHL33A6NCF5 533 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 SOWAHDA6NJG2 315 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 KIR2DS3K7RE56 304 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 HGSO14964 777 aaPredicted RBP16.6■□□□□ 0.25
USB1-211ENST00000565662 KCNJ13O60928 360 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 PTMAP06454 111 aaKnown RBP16.6■□□□□ 0.25
USB1-211ENST00000565662 JMJD7P0C870 316 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 MYF5P13349 255 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 VCLP18206 1134 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 HMGCLP35914 325 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 GEMP55040 296 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 TMPRSS3P57727 454 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 SQSTM1Q13501 440 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 GALNT3Q14435 633 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 PRPSAP1Q14558 356 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 KIR2DS5Q14953 304 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 NOMO1Q15155 1222 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 COL28A1Q2UY09 1125 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 DOK6Q6PKX4 331 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 SLC30A9Q6PML9 568 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 RAB11FIP2Q7L804 512 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 LYSMD3Q7Z3D4 306 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 TMC3Q7Z5M5 1100 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 PDZD3Q86UT5 571 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 PIM3Q86V86 326 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 PELI3Q8N2H9 469 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 LSM14AQ8ND56 463 aaKnown RBP16.6■□□□□ 0.25
USB1-211ENST00000565662 BRSK1Q8TDC3 778 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 ATXN7L3BQ96GX2 97 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 TSGA10Q9BZW7 698 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 ASCL3Q9NQ33 180 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 FEZ2Q9UHY8 353 aaPredicted RBP16.6■□□□□ 0.25
USB1-211ENST00000565662 ACSL6Q9UKU0 697 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 HYOU1Q9Y4L1 999 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 RNF215Q9Y6U7 377 aa16.6■□□□□ 0.25
USB1-211ENST00000565662 TEX51A0A1B0GUA7 166 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 CDRT15L2A8MXV6 281 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 ZZEF1O43149 2961 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 TLX3O43711 291 aaPredicted RBP16.59■□□□□ 0.25
USB1-211ENST00000565662 NUAK1O60285 661 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 SLC25A14O95258 325 aaPredicted RBP16.59■□□□□ 0.25
USB1-211ENST00000565662 GSDMDP57764 484 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 CCL7P80098 99 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 ITGA9Q13797 1035 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 GTF2H3Q13889 308 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 PCSK7Q16549 785 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 TMEM164Q5U3C3 297 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 PID1Q7Z2X4 250 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 SLC9B2Q86UD5 537 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 ZC3H18Q86VM9 953 aaKnown RBP16.59■□□□□ 0.25
USB1-211ENST00000565662 NRROSQ86YC3 692 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 FBXO39Q8N4B4 442 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
USB1-211ENST00000565662 GLYATL1Q969I3 302 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 GBA3Q9H227 469 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 EPB41L5Q9HCM4 733 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 TRIM39Q9HCM9 518 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 RSPH14Q9UHP6 348 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 AMFRQ9UKV5 643 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 PKP3Q9Y446 797 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 CHD6Q8TD26 2715 aa16.59■□□□□ 0.25
USB1-211ENST00000565662 LOC285095A0A1B0GVY8 99 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 H7C0C1 242 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 INPP4BO15327 924 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 DUX1O43812 170 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 DNAJC6O75061 913 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 ECEL1O95672 775 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 PECAM1P16284 738 aaPredicted RBP16.58■□□□□ 0.24
USB1-211ENST00000565662 NFKB1P19838 968 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 ATP5OP48047 213 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 PDX1P52945 283 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 EPHA4P54764 986 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 ZFP36L1Q07352 338 aaKnown RBP16.58■□□□□ 0.24
USB1-211ENST00000565662 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 UBL7Q96S82 380 aaPredicted RBP16.58■□□□□ 0.24
USB1-211ENST00000565662 TIMM29Q9BSF4 260 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 CEP41Q9BYV8 373 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 OSBPL8Q9BZF1 889 aa16.58■□□□□ 0.24
USB1-211ENST00000565662 SARS2Q9NP81 518 aaKnown RBP16.58■□□□□ 0.24
USB1-211ENST00000565662 SPATS2LQ9NUQ6 558 aaKnown RBP16.58■□□□□ 0.24
USB1-211ENST00000565662 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.58■□□□□ 0.24
USB1-211ENST00000565662 ZNHIT2Q9UHR6 403 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms