RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 CST8O60676 142 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 ITGA2BP08514 1039 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 TPM1P09493 284 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 NFKBIAP25963 317 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 SLC5A2P31639 672 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 ACTR1BP42025 376 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 SLC1A1P43005 524 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 ACTR1AP61163 376 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 ILF3Q12906 894 aaKnown RBP eCLIP14.59□□□□□ -0.07
USB1-210ENST00000565151 PDK1Q15118 436 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 PCSK7Q16549 785 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 KHDC1Q4VXA5 237 aaKnown RBP14.59□□□□□ -0.07
USB1-210ENST00000565151 KDELC1Q6UW63 502 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 TMC3Q7Z5M5 1100 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 NT5DC3Q86UY8 548 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 ZNF761Q86XN6 746 aaPredicted RBP14.59□□□□□ -0.07
USB1-210ENST00000565151 NDUFAF2Q8N183 169 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 EXD1Q8NHP7 514 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 PMEPA1Q969W9 287 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 FAM83DQ9H4H8 585 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 C10orf88Q9H8K7 445 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 GLOD4Q9HC38 313 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 UBP1Q9NZI7 540 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 SEPT10Q9P0V9 454 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 PCDHA13Q9Y5I0 950 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 DUSP10Q9Y6W6 482 aa14.59□□□□□ -0.07
USB1-210ENST00000565151 C9orf172C9J069 976 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 CCL4P13236 92 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 FECHP22830 423 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 ALDH4A1P30038 563 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 AMZ1Q400G9 498 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 TEX44Q53QW1 395 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 ARHGAP40Q5TG30 622 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 ALS2CLQ60I27 953 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 KAZNQ674X7 775 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 GPR155Q7Z3F1 870 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 RAVER1Q8IY67 606 aaKnown RBP14.58□□□□□ -0.08
USB1-210ENST00000565151 KIAA1524Q8TCG1 905 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.58□□□□□ -0.08
USB1-210ENST00000565151 SLC37A2Q8TED4 501 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 TEKT5Q96M29 485 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 ZNF830Q96NB3 372 aaPredicted RBP14.58□□□□□ -0.08
USB1-210ENST00000565151 TMEM74Q96NL1 305 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 UBL7Q96S82 380 aaPredicted RBP14.58□□□□□ -0.08
USB1-210ENST00000565151 GORASP1Q9BQQ3 440 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 MAK16Q9BXY0 300 aaKnown RBP14.58□□□□□ -0.08
USB1-210ENST00000565151 DPH1Q9BZG8 443 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 DDX56Q9NY93 547 aaKnown RBP14.58□□□□□ -0.08
USB1-210ENST00000565151 FOXJ2Q9P0K8 574 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 ATXN10Q9UBB4 475 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 TBC1D29Q9UFV1 150 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 PISDQ9UG56 409 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 LOXL2Q9Y4K0 774 aa14.58□□□□□ -0.08
USB1-210ENST00000565151 hCG_1818297A0A087WSY0 165 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 IGHV1OR21-1A0A087WYE8 117 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 IGHV5-10-1A0A0J9YXX1 117 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 SOWAHDA6NJG2 315 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 F5H423 210 aaPredicted RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 ATXN7O15265 892 aaPredicted RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 SPOPO43791 374 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 PMPCBO75439 489 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 ASMTLO95671 621 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 ZNF8P17098 575 aaPredicted RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 BPIP17213 487 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 WT1P19544 449 aaPredicted RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 MPSTP25325 297 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 CHRNA4P43681 627 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 CDK18Q07002 472 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 GALNT13Q8IUC8 556 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 KATNAL2Q8IYT4 538 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 RCBTB1Q8NDN9 531 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 SNRNP27Q8WVK2 155 aaKnown RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 HAUS1Q96CS2 278 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 OXNAD1Q96HP4 312 aaPredicted RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 CDH19Q9H159 772 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 ZFYVE1Q9HBF4 777 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 MAGEE1Q9HCI5 957 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 VPS18Q9P253 973 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 SLC23A2Q9UGH3 650 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 ZNHIT2Q9UHR6 403 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 KCNK6Q9Y257 313 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 ZNF711Q9Y462 761 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 PCDHGA7Q9Y5G6 932 aa14.57□□□□□ -0.08
USB1-210ENST00000565151 GCN1Q92616 2671 aaKnown RBP14.57□□□□□ -0.08
USB1-210ENST00000565151 PIKFYVEQ9Y2I7 2098 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 PRAMEF33A0A0G2JMD5 474 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 A0A0U1RQJ8 604 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 LOC285095A0A1B0GVY8 99 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 PRR19A6NJB7 356 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 RHPN2P1A8MT19 583 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 PPP1R12AO14974 1030 aaPredicted RBP14.56□□□□□ -0.08
USB1-210ENST00000565151 PSTPIP1O43586 416 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 PRAMEF10O60809 474 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 CPNE6O95741 557 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 SLC4A1P02730 911 aa14.56□□□□□ -0.08
USB1-210ENST00000565151 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
USB1-210ENST00000565151 NFKB1P19838 968 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms