RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 ZNF806P0C7X5 589 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 ECHS1P30084 290 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 RABIFP47224 123 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 NXPH1P58417 271 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 YPEL5P62699 121 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 CDK3Q00526 305 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 PDE1CQ14123 709 aaPredicted RBP12.39□□□□□ -0.43
KARS-204ENST00000564578 FASTKD3Q14CZ7 662 aaKnown RBP12.39□□□□□ -0.43
KARS-204ENST00000564578 NLRP9Q7RTR0 991 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 PTAR1Q7Z6K3 402 aaPredicted RBP12.39□□□□□ -0.43
KARS-204ENST00000564578 PDIK1LQ8N165 341 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 PPHLN1Q8NEY8 458 aaKnown RBP12.39□□□□□ -0.43
KARS-204ENST00000564578 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 HDAC10Q969S8 669 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 COX14Q96I36 57 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 RHOXF2Q9BQY4 288 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 MRM3Q9HC36 420 aaKnown RBP12.39□□□□□ -0.43
KARS-204ENST00000564578 GMEB2Q9UKD1 530 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 SNX11Q9Y5W9 270 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 TEX264Q9Y6I9 313 aa12.39□□□□□ -0.43
KARS-204ENST00000564578 ZCWPW2A0A1B0GU75 182 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 MAGEB16A2A368 324 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 OR51F1A6NGY5 319 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 TOR1BO14657 336 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 INPP4BO15327 924 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 FUCA1P04066 466 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 HOXC4P09017 264 aaPredicted RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 PRSS56P0CW18 603 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 CTSKP43235 329 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 CDKN1CP49918 316 aaPredicted RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 NFATC2Q13469 925 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 LAMB3Q13751 1172 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 FZD2Q14332 565 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 BBS9Q3SYG4 887 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 HP1BP3Q5SSJ5 553 aaPredicted RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 PRAMEF14Q5SWL7 426 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 ARMC3Q5W041 872 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 PIANPQ8IYJ0 282 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 PNPLA1Q8N8W4 532 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 BTN2A2Q8WVV5 523 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 RUBCNQ92622 972 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 EBNA1BP2Q99848 306 aaKnown RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 RRAGDQ9NQL2 400 aaPredicted RBP12.38□□□□□ -0.43
KARS-204ENST00000564578 GDF3Q9NR23 364 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 RXFP3Q9NSD7 469 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 SEMA4GQ9NTN9 838 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 SLC6A14Q9UN76 642 aa12.38□□□□□ -0.43
KARS-204ENST00000564578 PCDH15Q96QU1 1955 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 LNP1A1A4G5 178 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 CCDC162PA2VCL2 907 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 NDC80O14777 642 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 SLU7O95391 586 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 MYCLP1P12525 358 aaPredicted RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 MC4RP32245 332 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ELK3P41970 407 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ARCN1P48444 511 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 ARL4CP56559 192 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 CAV1Q03135 178 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 GRIK2Q13002 908 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 NFATC4Q14934 902 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 TEAD4Q15561 434 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 KHDC1Q4VXA5 237 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 PDPK2PQ6A1A2 396 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ZNF398Q8TD17 642 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 GLYATL1Q969I3 302 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 STAMBPL1Q96FJ0 436 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 HIC2Q96JB3 615 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ARFGAP3Q9NP61 516 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 NCDNQ9UBB6 729 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 MAD1L1Q9Y6D9 718 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 OAS3Q9Y6K5 1087 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 ZNF106Q9H2Y7 1883 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 TRBV5-4A0A0C4DH59 114 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 KHNYNO15037 678 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 LRP3O75074 770 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 CEACAM5P06731 702 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 PYGLP06737 847 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 KIAA1024LP59773 190 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 PDIA2Q13087 525 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 EIF2B5Q13144 721 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 CSRP2Q16527 193 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 TEX35Q5T0J7 233 aa12.37□□□□□ -0.43
KARS-204ENST00000564578 ZNF648Q5T619 568 aaPredicted RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 DCP2Q8IU60 420 aaKnown RBP12.37□□□□□ -0.43
KARS-204ENST00000564578 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms