RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 TMCC2O75069 709 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SP2Q02086 613 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 RFX4Q33E94 735 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 COLEC12Q5KU26 742 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TMEM110Q86TL2 294 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MKS1Q9NXB0 559 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 OPTCQ9UBM4 332 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 VPS51Q9UID3 782 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SDHDO14521 159 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 CYBBP04839 570 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 AQP1P29972 269 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 OR1G1P47890 313 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TBX4P57082 545 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ILF2Q12905 390 aaKnown RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ACAP2Q15057 778 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 FAM187BQ17R55 369 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TTLL9Q3SXZ7 439 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF549Q6P9A3 640 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 CDH24Q86UP0 819 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 UBE2J2Q8N2K1 259 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ARFGAP1Q8N6T3 406 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 PACRGLQ8N7B6 248 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TXNDC5Q8NBS9 432 aaKnown RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 RSPH1Q8WYR4 309 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 FBXO32Q969P5 355 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TMBIM1Q969X1 311 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MIR1-1HGQ9H1L0 117 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TMCC3Q9ULS5 477 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 FZD10Q9ULW2 581 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MGAT4DA6NG13 374 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 OR51F1A6NGY5 319 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 A8MX80 341 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF99A8MXY4 864 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TP73O15350 636 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MSI1O43347 362 aaKnown RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 AIREO43918 545 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 HOXB8P17481 243 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 PRKACGP22612 351 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ICAM3P32942 547 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 GRIA2P42262 883 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MAD2L1Q13257 205 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 LAPTM5Q13571 262 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 C1DQ13901 141 aaKnown RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TAB1Q15750 504 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF57Q68EA5 555 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 USP50Q70EL3 339 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 R3HCC1LQ7Z5L2 792 aaKnown RBP12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SLC15A4Q8N697 577 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SELENOMQ8WWX9 145 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SORT1Q99523 831 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 GPR22Q99680 433 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 MINDY3Q9H8M7 445 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 DYRK4Q9NR20 520 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 SIX4Q9UIU6 781 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 LRFN2Q9ULH4 789 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 PADI4Q9UM07 663 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 KLHL20Q9Y2M5 609 aa12.55□□□□□ -0.4
COMMD4-209ENST00000564068 PIPSLA2A3N6 862 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 RECQLP46063 649 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF132P52740 706 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ARPC4P59998 168 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 LUZP2Q86TE4 346 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 BIRC8Q96P09 236 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 TSSK3Q96PN8 268 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ANKRD33BA6NCL7 494 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 F5H5T6 163 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PIGRP01833 764 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 GNAO1P09471 354 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 KRT20P35900 424 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 OXCT1P55809 520 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 NCF4Q15080 339 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 DEFB115Q30KQ5 88 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 TIMM50Q3ZCQ8 353 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 NKAPQ8N5F7 415 aaKnown RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 CAMKK1Q8N5S9 505 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 AADATQ8N5Z0 425 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 OR10Q1Q8NGQ4 319 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF778Q96MU6 729 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 POLR1EQ9GZS1 481 aaKnown RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 PDZD7Q9H5P4 517 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 RBM47A0AV96 593 aaKnown RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 EIF2S1P05198 315 aaKnown RBP12.54□□□□□ -0.4
COMMD4-209ENST00000564068 RRM2P31350 389 aa12.54□□□□□ -0.4
COMMD4-209ENST00000564068 CDH5P33151 784 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms