RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TMEM253P0C7T8 217 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 ZNF28P17035 718 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 VARSP26640 1264 aaKnown RBP15.84■□□□□ 0.13
RNF40-205ENST00000563909 TRIM23P36406 574 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 MAGEA1P43355 309 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 PTPN9P43378 593 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 CCDC14Q49A88 953 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 TRNP1Q6NT89 227 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 LYSMD3Q7Z3D4 306 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 FAM131BQ86XD5 332 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 TMEM139Q8IV31 216 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 Q8NA96 180 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 GALNT6Q8NCL4 622 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 OR10G6Q8NH81 332 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 CFAP57Q96MR6 1250 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 MFRPQ9BY79 579 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 WDR26Q9H7D7 661 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 NDFIP2Q9NV92 336 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 TRNAU1APQ9NX07 287 aaKnown RBP15.84■□□□□ 0.13
RNF40-205ENST00000563909 MFHAS1Q9Y4C4 1052 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 ST14Q9Y5Y6 855 aa15.84■□□□□ 0.13
RNF40-205ENST00000563909 TMEM191CA6NGB0 347 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 BUB1O43683 1085 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 LRCH4O75427 683 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 TMCC1O94876 653 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 PIGNO95427 931 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 FUCA1P04066 466 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 MMP12P39900 470 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 GNPDA1P46926 289 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 CCL11P51671 97 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 ZNF143P52747 638 aaPredicted RBP15.83■□□□□ 0.12
RNF40-205ENST00000563909 RPL7AP62424 266 aaKnown RBP15.83■□□□□ 0.12
RNF40-205ENST00000563909 ZRANB3Q5FWF4 1079 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 WDR74Q6RFH5 385 aaPredicted RBP15.83■□□□□ 0.12
RNF40-205ENST00000563909 LRRC8AQ8IWT6 810 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 FNIP1Q8TF40 1166 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 SLC38A3Q99624 504 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 NCAPGQ9BPX3 1015 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 PACSIN1Q9BY11 444 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 MLXIPLQ9NP71 852 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 UVRAGQ9P2Y5 699 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 DNAI1Q9UI46 699 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 PHTF1Q9UMS5 762 aa15.83■□□□□ 0.12
RNF40-205ENST00000563909 PCDHGA9Q9Y5G4 932 aaKnown RBP15.83■□□□□ 0.12
RNF40-205ENST00000563909 DCHS2Q6V1P9 2916 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 DOCK4Q8N1I0 1966 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 RHOAP61586 193 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 ATP11AP98196 1134 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 CTBSQ01459 385 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 CHAF1BQ13112 559 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 ZXDCQ2QGD7 858 aaPredicted RBP15.82■□□□□ 0.12
RNF40-205ENST00000563909 CPZQ66K79 652 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 SP5Q6BEB4 398 aaPredicted RBP15.82■□□□□ 0.12
RNF40-205ENST00000563909 PNCKQ6P2M8 343 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 RAD9BQ6WBX8 426 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 STRADAQ7RTN6 431 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 BNIPLQ7Z465 357 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 HCAR2Q8TDS4 363 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 NCSTNQ92542 709 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 CENPIQ92674 756 aaPredicted RBP15.82■□□□□ 0.12
RNF40-205ENST00000563909 STAMBPL1Q96FJ0 436 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 CNPY3Q9BT09 278 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 NUP85Q9BW27 656 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 CTTNBP2NLQ9P2B4 639 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 OR12D3Q9UGF7 316 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 KLHL3Q9UH77 587 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 ATP8A1Q9Y2Q0 1164 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 PCDHA13Q9Y5I0 950 aa15.82■□□□□ 0.12
RNF40-205ENST00000563909 TRBV23OR9-2A0A075B6M9 112 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 KDELR3O43731 214 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 RECKO95980 971 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 CEACAM5P06731 702 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 PSMA2P25787 234 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 MAPKAPK2P49137 400 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 FOXM1Q08050 763 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 PEX6Q13608 980 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 CDO1Q16878 200 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 C15orf59Q2T9L4 293 aaPredicted RBP15.81■□□□□ 0.12
RNF40-205ENST00000563909 CFAP58Q5T655 872 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 PAPD7Q5XG87 772 aaKnown RBP15.81■□□□□ 0.12
RNF40-205ENST00000563909 RWDD4Q6NW29 188 aaKnown RBP15.81■□□□□ 0.12
RNF40-205ENST00000563909 RHOT2Q8IXI1 618 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 PELI3Q8N2H9 469 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 TXLNBQ8N3L3 684 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
RNF40-205ENST00000563909 CCDC168Q8NDH2 2452 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 FAM172AQ8WUF8 416 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 POM121Q96HA1 1249 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 PDLIM2Q96JY6 352 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 EXOC2Q96KP1 924 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 MAGEH1Q9H213 219 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 SUV39H2Q9H5I1 410 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 LCMT1Q9UIC8 334 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 ITGB1BP2Q9UKP3 347 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 SUFUQ9UMX1 484 aa15.81■□□□□ 0.12
RNF40-205ENST00000563909 TSPAN11A1L157 253 aa15.8■□□□□ 0.12
RNF40-205ENST00000563909 CFAP69A5D8W1 941 aa15.8■□□□□ 0.12
RNF40-205ENST00000563909 ANKUB1A6NFN9 424 aa15.8■□□□□ 0.12
RNF40-205ENST00000563909 MYO1FO00160 1098 aa15.8■□□□□ 0.12
RNF40-205ENST00000563909 CCP110O43303 1012 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms