RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GDF3Q9NR23 364 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 TREX1Q9NSU2 369 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 RAPGEFL1Q9UHV5 662 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 CRLS1Q9UJA2 301 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 CHMP2BQ9UQN3 213 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 RPS6KL1Q9Y6S9 549 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 CCDC162PA2VCL2 907 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 E7ESA3 106 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 LRP3O75074 770 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 USP1O94782 785 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 SYPP08247 313 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ELK3P41970 407 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ARSDP51689 593 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 NXPH1P58417 271 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 XIAPP98170 497 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 CACNG1Q06432 222 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 NFATC2Q13469 925 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 PEX6Q13608 980 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ANKRD20A4Q4UJ75 823 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ATP13A5Q4VNC0 1218 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 PLA2G2CQ5R387 149 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 KIAA0930Q6ICG6 404 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-207ENST00000563109 CES3Q6UWW8 571 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ZBED8Q8IZ13 594 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 AGGF1Q8N302 714 aaeCLIP18.68■□□□□ 0.58
RAB40C-207ENST00000563109 GPR161Q8N6U8 529 aaKnown RBP18.68■□□□□ 0.58
RAB40C-207ENST00000563109 GDAP1Q8TB36 358 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 RUBCNQ92622 972 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 MFSD3Q96ES6 412 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 CFAP36Q96G28 342 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 WDR92Q96MX6 357 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 FMO2Q99518 471 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ZDHHC5Q9C0B5 715 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 SUDS3Q9H7L9 328 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-207ENST00000563109 CAPN10Q9HC96 672 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 GPR27Q9NS67 375 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ZDHHC18Q9NUE0 388 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 SMOXQ9NWM0 555 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ZC3H7BQ9UGR2 993 aaKnown RBP18.68■□□□□ 0.58
RAB40C-207ENST00000563109 ANKRD6Q9Y2G4 727 aa18.68■□□□□ 0.58
RAB40C-207ENST00000563109 PLXNB3Q9ULL4 1909 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 PATE3B3GLJ2 98 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 GAPDHSO14556 408 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-207ENST00000563109 SLC25A14O95258 325 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-207ENST00000563109 GOT2P00505 430 aaKnown RBP18.67■□□□□ 0.58
RAB40C-207ENST00000563109 GRIK2Q13002 908 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 GPR33Q49SQ1 333 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 SPANXN3Q5MJ09 141 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 HP1BP3Q5SSJ5 553 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-207ENST00000563109 IL27RAQ6UWB1 636 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 TMEM135Q86UB9 458 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 PARGQ86W56 976 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 ANKMY2Q8IV38 441 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 SLC22A18ASQ8N1D0 253 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 OXR1Q8N573 874 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 OTUD6BQ8N6M0 293 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB40C-207ENST00000563109 OR4L1Q8NH43 312 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 PYROXD1Q8WU10 500 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 UBXN4Q92575 508 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 TTC1Q99614 292 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 ZCCHC2Q9C0B9 1178 aaKnown RBP18.67■□□□□ 0.58
RAB40C-207ENST00000563109 TEX264Q9Y6I9 313 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 WDFY4Q6ZS81 3184 aa18.67■□□□□ 0.58
RAB40C-207ENST00000563109 SPTY2D1-AS1A0A0U1RR47 76 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A9O60656 530 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 VAPBO95292 243 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 ASMTLO95671 621 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A6P19224 532 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A1P22309 533 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A4P22310 534 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 AKT1P31749 480 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A3P35503 534 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A5P35504 534 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 CARSP49589 748 aaKnown RBP18.66■□□□□ 0.58
RAB40C-207ENST00000563109 SPEM2Q0P670 501 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 CBLBQ13191 982 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 GTF2H3Q13889 308 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 CRYMQ14894 314 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 LONRF1Q17RB8 773 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 KIF19Q2TAC6 998 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 FASTKD1Q53R41 847 aaKnown RBP18.66■□□□□ 0.58
RAB40C-207ENST00000563109 AARS2Q5JTZ9 985 aaKnown RBP18.66■□□□□ 0.58
RAB40C-207ENST00000563109 LDLRAP1Q5SW96 308 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 DOK6Q6PKX4 331 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 ENPP7Q6UWV6 458 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 TAS2R42Q7RTR8 314 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 TRIM74Q86UV6 250 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 FBXO36Q8NEA4 188 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 OR56A4Q8NGH8 313 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 GABPB2Q8TAK5 448 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-207ENST00000563109 COX14Q96I36 57 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 LGR4Q9BXB1 951 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 SMOC1Q9H4F8 434 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A7Q9HAW7 530 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A10Q9HAW8 530 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 UGT1A8Q9HAW9 530 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 CATSPERZQ9NTU4 200 aa18.66■□□□□ 0.58
RAB40C-207ENST00000563109 KLQ9UEF7 1012 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms