RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 HAPLN4Q86UW8 402 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 FOXRED2Q8IWF2 684 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 CHERPQ8IWX8 916 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 DIS3L2Q8IYB7 885 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 CSNK2A3Q8NEV1 391 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 RND1Q92730 232 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 INTS12Q96CB8 462 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 TMEM68Q96MH6 324 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 STRA6Q9BX79 667 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 MOV10L1Q9BXT6 1211 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 MMP25Q9NPA2 562 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 PCDHB16Q9NRJ7 776 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 IRAK4Q9NWZ3 460 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 DLGAP2Q9P1A6 1054 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 MKLN1Q9UL63 735 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 ARHGEF11O15085 1522 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 P2RY10O00398 339 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 VCYO14598 125 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 PAGE4O60829 102 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 CCNDBP1O95273 360 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 IPO7O95373 1038 aaKnown RBP3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 CLEC3BP05452 202 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 SPARCP09486 303 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 CFTRP13569 1480 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 HOXC9P31274 260 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 IL15P40933 162 aaPredicted RBP3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 TMPOP42166 694 aaKnown RBP3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 FASLGP48023 281 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 FOXM1Q08050 763 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 ZBTB17Q13105 803 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 KCNT1Q5JUK3 1230 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 FRG2Q64ET8 278 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 CCDC13Q8IYE1 715 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 PAF1Q8N7H5 531 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF441Q8N8Z8 693 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 SPATA22Q8NHS9 363 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 SORCS1Q8WY21 1168 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 RRNAD1Q96FB5 475 aaKnown RBP3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 C7orf26Q96N11 449 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 MAP7D2Q96T17 732 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 PCGF1Q9BSM1 259 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 USP44Q9H0E7 712 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 KCNN2Q9H2S1 579 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC28A3Q9HAS3 691 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 ABI3Q9P2A4 366 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 LOXL2Q9Y4K0 774 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 PSAT1Q9Y617 370 aa3.06□□□□□ -1.92
HDGFL3-202ENST00000562702 EIF4G3O43432 1585 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 ARAP1Q96P48 1450 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 CGNL1Q0VF96 1302 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 FAM237AA0A1B0GTK4 181 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 J3KRW8 73 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 SPINT2O43291 252 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 EXTL3O43909 919 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 NKX2-2O95096 273 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 EGFP01133 1207 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 S1PR1P21453 382 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF10P21506 573 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 PSMA4P25789 261 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 DDIT3P35638 169 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 GNL1P36915 607 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 BRWD1-AS2P59051 145 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 TMEM115Q12893 351 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 CSTF3Q12996 717 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 FRG1Q14331 258 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 TBCEQ15813 527 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 TSTQ16762 297 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 SYT16Q17RD7 645 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 CXorf66Q5JRM2 361 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 IRAK1BP1Q5VVH5 260 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 PLA2G4FQ68DD2 849 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 TRNP1Q6NT89 227 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 DUS1LQ6P1R4 473 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 DPPA4Q7L190 304 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 CPLX4Q7Z7G2 160 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 RNF113BQ8IZP6 322 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 PCDH20Q8N6Y1 951 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 TMEM116Q8NCL8 245 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 OR2AK2Q8NG84 335 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 LNX1Q8TBB1 728 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 GRAPLQ8TC17 118 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 ORAI1Q96D31 301 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 MMABQ96EY8 250 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 CDCA5Q96FF9 252 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 ACOX2Q99424 681 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 PYGO2Q9BRQ0 406 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 RBM4Q9BWF3 364 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 SCPEP1Q9HB40 452 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 FBRSL1Q9HCM7 1045 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF334Q9HCZ1 680 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 ACSS1Q9NUB1 689 aaPredicted RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 LIMA1Q9UHB6 759 aaKnown RBP3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 POU2F3Q9UKI9 436 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 KCNS2Q9ULS6 477 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 MAU2Q9Y6X3 613 aa3.05□□□□□ -1.92
HDGFL3-202ENST00000562702 TARBP1Q13395 1621 aaKnown RBP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 AQRO60306 1485 aaKnown RBP eCLIP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 RSF1Q96T23 1441 aaPredicted RBP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 LILRA5A6NI73 299 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms