RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HADHQ16836 314 aaKnown RBP16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ALKBH5Q6P6C2 394 aaKnown RBP16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CHST15Q7LFX5 561 aaPredicted RBP16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FAM129CQ86XR2 697 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PQLC3Q8N755 202 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CCDC112Q8NEF3 446 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LPCAT1Q8NF37 534 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SLC38A3Q99624 504 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZNF670Q9BS34 389 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PCDH9Q9HC56 1237 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SLC39A1Q9NY26 324 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 VPS18Q9P253 973 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TBC1D29Q9UFV1 150 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 AMACRQ9UHK6 382 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZNHIT2Q9UHR6 403 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 NENFQ9UMX5 172 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 C1orf232A0A0U1RR37 186 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 A6NCN8 305 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 EFCAB7A8K855 629 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 B4E171 279 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DUX1O43812 170 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 MMP2P08253 660 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TSPAN7P41732 249 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RPL26P61254 145 aaKnown RBP16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZBED6P86452 979 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FANCCQ00597 558 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 HHEXQ03014 270 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SLC10A2Q12908 348 aaPredicted RBP16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 NFKBIBQ15653 356 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 HENMT1Q5T8I9 393 aaKnown RBP16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ANKS6Q68DC2 871 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LUZP1Q86V48 1076 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RAVER1Q8IY67 606 aaKnown RBP16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 IL22RA1Q8N6P7 574 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 KCTD6Q8NC69 237 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 OR10G6Q8NH81 332 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FAF2Q96CS3 445 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 AHCYL2Q96HN2 611 aaKnown RBP16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZMYND15Q9H091 742 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CAPN11Q9UMQ6 739 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RPL26L1Q9UNX3 145 aaKnown RBP16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 KCNK6Q9Y257 313 aa16.55■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 A8MU76 341 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SUV39H1O43463 412 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RAD1O60671 282 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 GYPCP04921 128 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SFTPCP11686 197 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CA4P22748 312 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SPINT3P49223 89 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CSRP3P50461 194 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 NFATC2Q13469 925 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PDK2Q15119 407 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 QPCTQ16769 361 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DCAF12Q5T6F0 453 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 IYDQ6PHW0 289 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 WDR74Q6RFH5 385 aaPredicted RBP16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CACNA2D3Q8IZS8 1091 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 EID2BQ96D98 161 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 HDAC11Q96DB2 347 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ASPSCR1Q9BZE9 553 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CBX8Q9HC52 389 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SARS2Q9NP81 518 aaKnown RBP16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 GEMIN8Q9NWZ8 242 aaKnown RBP16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PILRAQ9UKJ1 303 aa16.54■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CYSRT1A8MQ03 144 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PROSCO94903 275 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ACP5P13686 325 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CD86P42081 329 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PPM1FP49593 454 aaPredicted RBP16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RAB15P59190 212 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SNAP47Q5SQN1 464 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ATG14Q6ZNE5 492 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ARHGAP22Q7Z5H3 698 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CNTD1Q8N815 330 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 COL26A1Q96A83 441 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RTP4Q96DX8 246 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CTRCQ99895 268 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SPRY4Q9C004 299 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SLC25A18Q9H1K4 315 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FAM83DQ9H4H8 585 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 HAUS2Q9NVX0 235 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DTLQ9NZJ0 730 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 IL17BQ9UHF5 180 aa16.53■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RELNP78509 3460 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ANKRD66B4E2M5 251 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 KCNK1O00180 336 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PPFIA2O75334 1257 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 JCHAINP01591 159 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 F3P13726 295 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 MX2P20592 715 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 UBASH3AP57075 661 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 MC2RQ01718 297 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZBTB17Q13105 803 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 GALNT3Q14435 633 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 BORAQ6PGQ7 559 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LYSMD3Q7Z3D4 306 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms