RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 LDB1Q86U70 411 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LCA5Q86VQ0 697 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 C12orf40Q86WS4 652 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CAMK1DQ8IU85 385 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PIANPQ8IYJ0 282 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PCDH20Q8N6Y1 951 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 BEND7Q8N7W2 519 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TEX19Q8NA77 164 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TTC16Q8NEE8 873 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OR4K2Q8NGD2 314 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OR2AP1Q8NGE2 309 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OR6K2Q8NGY2 324 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OR4L1Q8NH43 312 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 GRIN3AQ8TCU5 1115 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OSCP1Q8WVF1 389 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LPGAT1Q92604 370 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CRELD1Q96HD1 420 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 RPL10LQ96L21 214 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 UBXN10Q96LJ8 280 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 C7orf26Q96N11 449 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 DEPDC7Q96QD5 511 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MCCC1Q96RQ3 725 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LYSMD1Q96S90 227 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 FAM83CQ9BQN1 747 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 BBS2Q9BXC9 721 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 ADGRE3Q9BY15 652 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PITPNM3Q9BZ71 974 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CPEB1Q9BZB8 566 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TM6SF2Q9BZW4 377 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 NSRP1Q9H0G5 558 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TNKS2Q9H2K2 1166 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 KCNK13Q9HB14 408 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MAGEE1Q9HCI5 957 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 DZANK1Q9NVP4 752 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 POLR3BQ9NW08 1133 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CLDND1Q9NY35 253 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OBP2AQ9NY56 170 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 HACD3Q9P035 362 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TXNDC16Q9P2K2 825 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 SLCO3A1Q9UIG8 710 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CDH22Q9UJ99 828 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 SLC27A6Q9Y2P4 619 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 ZNF711Q9Y462 761 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MTF2Q9Y483 593 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MTCH2Q9Y6C9 303 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 DENND4AQ7Z401 1863 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CDH23Q9H251 3354 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 KIAA1549LQ6ZVL6 1849 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 TSPAN11A1L157 253 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 FAM221BA6H8Z2 402 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CAPN8A6NHC0 703 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 OTOL1A6NHN0 477 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CCT8L1PA6NM43 557 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 C2orf81A6NN90 581 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 LINC01565O15544 149 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 NDUFB5O43674 189 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ITM2AO43736 263 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 KLHL2O95198 593 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 IGSF6O95976 241 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 DLDP09622 509 aaKnown RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ALPIP09923 528 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ARSAP15289 507 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 FDXRP22570 491 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 HNF1BP35680 557 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 STC1P52823 247 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 SEC13P55735 322 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 PRAMEP78395 509 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 TMPRSS15P98073 1019 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ECT2LQ008S8 904 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 SULT2A1Q06520 285 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 SF3A3Q12874 501 aaKnown RBP eCLIP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ILF2Q12905 390 aaKnown RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 IFT88Q13099 833 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CHI3L2Q15782 390 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 SEPT7Q16181 437 aaKnown RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CCDC153Q494R4 210 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 FASTKD1Q53R41 847 aaKnown RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CARD16Q5EG05 197 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 RARS2Q5T160 578 aaKnown RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ARMC12Q5T9G4 340 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 HECTD2Q5U5R9 776 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 TRIM68Q6AZZ1 485 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ANKRD54Q6NXT1 300 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 AFTPHQ6ULP2 937 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ZYG11AQ6WRX3 759 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 DPY19L3Q6ZPD9 716 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 GLT6D1Q7Z4J2 308 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 NUDCD3Q8IVD9 361 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 C10orf107Q8IVU9 208 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 PHTF2Q8N3S3 785 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 EFHBQ8N7U6 833 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ZNF557Q8N988 423 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-210ENST00000561817 CHST14Q8NCH0 376 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 OR2A12Q8NGT7 310 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 OR6P1Q8NGX9 317 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 RFWD2Q8NHY2 731 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ZNF398Q8TD17 642 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 KCTD4Q8WVF5 259 aa6.51□□□□□ -1.37
CAPN3-210ENST00000561817 ANKRD49Q8WVL7 239 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms