RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TRIM74Q86UV6 250 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TRIM73Q86UV7 250 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TICAM1Q8IUC6 712 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 CADM3Q8N126 398 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TTC39CQ8N584 583 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TMEM116Q8NCL8 245 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 MCPH1Q8NEM0 835 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 GJC3Q8NFK1 279 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 CEP76Q8TAP6 659 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TMEM174Q8WUU8 243 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 MOAP1Q96BY2 351 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 FBXL8Q96CD0 374 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 VCPIP1Q96JH7 1222 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 HARBI1Q96MB7 349 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 FTOQ9C0B1 505 aaKnown RBP eCLIP3.84□□□□□ -1.79
HERC1-215ENST00000561436 LHPPQ9H008 270 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 CATSPERBQ9H7T0 1116 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 SMYD2Q9NRG4 433 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 SLC6A13Q9NSD5 602 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 SEPT11Q9NVA2 429 aaKnown RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 ANKRD10Q9NXR5 420 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TUBA8Q9NY65 449 aaPredicted RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 NDRG3Q9UGV2 375 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 CORO1CQ9ULV4 474 aaPredicted RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 TMEM5Q9Y2B1 443 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 SRPRBQ9Y5M8 271 aaKnown RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 B4DLN1 442 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 H0YGN5 161 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TAF4O00268 1085 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 SEC14L5O43304 696 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 DOK2O60496 412 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 PAGE4O60829 102 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 MOSPD3O75425 235 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 SLC25A12O75746 678 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 SEC31AO94979 1220 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 IFNA2P01563 188 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 FGBP02675 491 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TMEM191BP0C7N4 346 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CBSLP0DN79 551 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CHRNB1P11230 501 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 PRF1P14222 555 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TMEM11P17152 192 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 MYF6P23409 242 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TBXAS1P24557 533 aaPredicted RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 RYKP34925 604 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CBSP35520 551 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 PSMB10P40306 273 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 PBX3P40426 434 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 ME1P48163 572 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CLCN5P51795 746 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TFAP4Q01664 338 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 MTX1Q13505 466 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 OLIG2Q13516 323 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 RBMS2Q15434 407 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 MED22Q15528 200 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 LRIT3Q3SXY7 679 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 MANEAQ5SRI9 462 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CFAP58Q5T655 872 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 LRCH2Q5VUJ6 765 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 FAM109BQ6ICB4 259 aaPredicted RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 TTI2Q6NXR4 508 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 KLHL35Q6PF15 583 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 DLK2Q6UY11 383 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 ERO1BQ86YB8 467 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TDRPQ86YL5 185 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 ARHGAP12Q8IWW6 846 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TAGAPQ8N103 731 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 ARFGAP1Q8N6T3 406 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 ZNF548Q8NEK5 533 aaPredicted RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 C16orf52Q8NHV5 167 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CREB3L4Q8TEY5 395 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 SNRNP27Q8WVK2 155 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 SGCDQ92629 289 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TMEM18Q96B42 140 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 NSUN4Q96CB9 384 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 CALML4Q96GE6 196 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TMEM68Q96MH6 324 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 NLRP4Q96MN2 994 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 YME1L1Q96TA2 773 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 MXRA8Q9BRK3 442 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 THUMPD2Q9BTF0 503 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 GHITMQ9H3K2 345 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 KIF9Q9HAQ2 790 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CD209Q9NNX6 404 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 INTS6Q9UL03 887 aaKnown RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 MKLN1Q9UL63 735 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 COG5Q9UP83 839 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 SLC45A1Q9Y2W3 748 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 PAM16Q9Y3D7 125 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 HS3ST3B1Q9Y662 390 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 SESN1Q9Y6P5 492 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 CAPN7Q9Y6W3 813 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 ASTN2O75129 1339 aaPredicted RBP3.83□□□□□ -1.8
HERC1-215ENST00000561436 FAM205AQ6ZU69 1335 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 TIAM2Q8IVF5 1701 aa3.83□□□□□ -1.8
HERC1-215ENST00000561436 KIF20BQ96Q89 1820 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms