RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ARSDP51689 593 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 THOP1P52888 689 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 C21orf59P57076 290 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 TUBB4BP68371 445 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 XIAPP98170 497 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 CDK3Q00526 305 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ACVR1Q04771 509 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 CBLBQ13191 982 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ITGA9Q13797 1035 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 PDE1CQ14123 709 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 PTK2BQ14289 1009 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ANKRD20A4Q4UJ75 823 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ATP13A5Q4VNC0 1218 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 DNAJC21Q5F1R6 531 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ARMC3Q5W041 872 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 PDPK2PQ6A1A2 396 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ADAMTSL4Q6UY14 1074 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 KYAT3Q6YP21 454 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 PTAR1Q7Z6K3 402 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 TMEM135Q86UB9 458 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 HEATR4Q86WZ0 1026 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 IGDCC3Q8IVU1 814 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 IFT20Q8IY31 132 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 SLC22A18ASQ8N1D0 253 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 DCLK2Q8N568 766 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 OR6P1Q8NGX9 317 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 BTN2A2Q8WVV5 523 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 PEX13Q92968 403 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 STAMBPL1Q96FJ0 436 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 FCRL3Q96P31 734 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 EBNA1BP2Q99848 306 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 TRIM56Q9BRZ2 755 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 NUSAP1Q9BXS6 441 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 FAM96AQ9H5X1 160 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 WDR26Q9H7D7 661 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 MRM3Q9HC36 420 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 CAPN10Q9HC96 672 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 FSCN3Q9NQT6 498 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 GDF3Q9NR23 364 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 PHPT1Q9NRX4 125 aaPredicted RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 TREX1Q9NSU2 369 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 CNOT6Q9ULM6 557 aaKnown RBP10.21□□□□□ -0.77
LRRC28-221ENST00000561276 TEX264Q9Y6I9 313 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 SLC30A1Q9Y6M5 507 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 RPS6KL1Q9Y6S9 549 aa10.21□□□□□ -0.77
LRRC28-221ENST00000561276 LRP4O75096 1905 aa10.21□□□□□ -0.78
LRRC28-221ENST00000561276 CUL9Q8IWT3 2517 aa10.21□□□□□ -0.78
LRRC28-221ENST00000561276 VPS13AQ96RL7 3174 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 USP34Q70CQ2 3546 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 SPTY2D1-AS1A0A0U1RR47 76 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CCDC162PA2VCL2 907 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 OR51F1A6NGY5 319 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 AGAP14A8MT82 685 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 E7ESA3 106 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CACNB4O00305 520 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-221ENST00000561276 GPR39O43194 453 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 VAPBO95292 243 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 MYCLP1P12525 358 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-221ENST00000561276 HTR1BP28222 390 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CA5AP35218 305 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CDKN1CP49918 316 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-221ENST00000561276 PRAMEP78395 509 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 BNC1Q01954 994 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 NFATC2Q13469 925 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 FZD2Q14332 565 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 HLTFQ14527 1009 aaKnown RBP eCLIP10.2□□□□□ -0.78
LRRC28-221ENST00000561276 KIF19Q2TAC6 998 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 GPR33Q49SQ1 333 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 ZRANB3Q5FWF4 1079 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 PRAMEF14Q5SWL7 426 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 TPRG1LQ5T0D9 272 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 ENPP7Q6UWV6 458 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 MICALCLQ6ZW33 695 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CENPUQ71F23 418 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 TAS2R42Q7RTR8 314 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CCDC25Q86WR0 208 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
LRRC28-221ENST00000561276 CCNJLQ8IV13 435 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 ZBED8Q8IZ13 594 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 OR4L1Q8NH43 312 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 GDAP1Q8TB36 358 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 RUBCNQ92622 972 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 GLYATL1Q969I3 302 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 LRRC39Q96DD0 335 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 COX14Q96I36 57 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 VPS35Q96QK1 796 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 PCDH15Q96QU1 1955 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 NAT9Q9BTE0 207 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 FAM129AQ9BZQ8 928 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 FOXP3Q9BZS1 431 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 ARFGAP3Q9NP61 516 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 GPR27Q9NS67 375 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 SEMA4GQ9NTN9 838 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 TMPRSS11EQ9UL52 423 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 TMEM98Q9Y2Y6 226 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 SNX11Q9Y5W9 270 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 FAM169AQ9Y6X4 670 aa10.2□□□□□ -0.78
LRRC28-221ENST00000561276 ZCWPW2A0A1B0GU75 182 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms