RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TECRLQ5HYJ1 363 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 C9orf64Q5T6V5 341 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 UGT3A1Q6NUS8 523 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 CHRDL2Q6WN34 429 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 DPPA4Q7L190 304 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SERPINA9Q86WD7 417 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 PNPLA1Q8N8W4 532 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SMRP1Q8NCR6 262 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 C10orf82Q8WW14 230 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SUSD6Q92537 303 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 FGF14Q92915 247 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 GTSE1Q9NYZ3 720 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 CPSF2Q9P2I0 782 aaKnown RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 THAP10Q9P2Z0 257 aaPredicted RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 XPR1Q9UBH6 696 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 C16orf96A6NNT2 1141 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ANHXE9PGG2 379 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 F8W8V4 182 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 TK2O00142 265 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 DNAJC6O75061 913 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 APODP05090 189 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 BMP1P13497 986 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ZNF37AP17032 561 aaPredicted RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ATP5F1P24539 256 aaPredicted RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ITGB7P26010 798 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ACRV1P26436 265 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 SERPINB5P36952 375 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 GLRBP48167 497 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 PGGT1BP53609 377 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ATP6V0D1P61421 351 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 PFKPQ01813 784 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 CTSL3PQ5NE16 218 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ERAP2Q6P179 960 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 TMEM207Q6UWW9 146 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 CCDC121Q6ZUS5 278 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 DSG4Q86SJ6 1040 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 PIM3Q86V86 326 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 NXPE1Q8N323 547 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 NKAPQ8N5F7 415 aaKnown RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 GPR26Q8NDV2 337 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 RHEBL1Q8TAI7 183 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 ANKRD49Q8WVL7 239 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 DERL2Q9GZP9 239 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 CLPBQ9H078 707 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 KDM4CQ9H3R0 1056 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 TFB2MQ9H5Q4 396 aaKnown RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 NPHS2Q9NP85 383 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 PCDH12Q9NPG4 1184 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 CRLS1Q9UJA2 301 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 TRMT6Q9UJA5 497 aaKnown RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 PPM1HQ9ULR3 514 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 FNDC3AQ9Y2H6 1198 aaKnown RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 MED16Q9Y2X0 877 aa17.01■□□□□ 0.31
HDDC3-206ENST00000561036 LAMA2P24043 3122 aaKnown RBP17.01■□□□□ 0.31
HDDC3-206ENST00000561036 DLX3O60479 287 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 SP100P23497 879 aaPredicted RBP17■□□□□ 0.31
HDDC3-206ENST00000561036 TNFRSF4P43489 277 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 CCDC15Q0P6D6 951 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 OVGP1Q12889 678 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 HTR4Q13639 388 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 SERPINA13PQ6UXR4 307 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 ZCCHC23Q6ZST2 131 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 TRPM8Q7Z2W7 1104 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 SLC22A9Q8IVM8 553 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 GBP7Q8N8V2 638 aaPredicted RBP17■□□□□ 0.31
HDDC3-206ENST00000561036 PPP1R16AQ96I34 528 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 MTG2Q9H4K7 406 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 KCNK4Q9NYG8 393 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 CD207Q9UJ71 328 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 GNPTGQ9UJJ9 305 aa17■□□□□ 0.31
HDDC3-206ENST00000561036 A8MX80 341 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 PSMD11O00231 422 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 OR1I1O60431 355 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 NPHS1O60500 1241 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 DCTN3O75935 186 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 HNRNPLP14866 589 aaKnown RBP eCLIP16.99■□□□□ 0.31
HDDC3-206ENST00000561036 CD1DP15813 335 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 TFEBP19484 476 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 MMP12P39900 470 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 SETMARQ53H47 684 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-206ENST00000561036 PAQR3Q6TCH7 311 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 MACC1Q6ZN28 852 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 ISCA2Q86U28 154 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 NRSN1Q8IZ57 195 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 SPATA6LQ8N4H0 392 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 ST13P5Q8NFI4 369 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-206ENST00000561036 CSGALNACT1Q8TDX6 532 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 CCT6BQ92526 530 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 CHFRQ96EP1 664 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 FAM129BQ96TA1 746 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 GPR21Q99679 349 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 GATA5Q9BWX5 397 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-206ENST00000561036 DRC3Q9H069 523 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 SMOXQ9NWM0 555 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 ZDHHC3Q9NYG2 299 aa16.99■□□□□ 0.31
HDDC3-206ENST00000561036 KLHL42Q9P2K6 505 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms