RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TUBB1Q9H4B7 451 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 EPS8L2Q9H6S3 715 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 PLEKHA5Q9HAU0 1116 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 MYOZ2Q9NPC6 264 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 ASPDHA6ND91 283 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 UPK1AO00322 258 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 AZIN1O14977 448 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 MTSS1O43312 755 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 DEAF1O75398 565 aaPredicted RBP16.42■□□□□ 0.22
TPM1-228ENST00000560975 LBPP18428 481 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 SCNN1AP37088 669 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 KCNK10P57789 538 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 CD47Q08722 323 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 LAPTM5Q13571 262 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 DENND5AQ6IQ26 1287 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 UGT3A1Q6NUS8 523 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 VASH1Q7L8A9 365 aaPredicted RBP16.42■□□□□ 0.22
TPM1-228ENST00000560975 MINDY2Q8NBR6 621 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 HDAC2Q92769 488 aaKnown RBP16.42■□□□□ 0.22
TPM1-228ENST00000560975 TRIM54Q9BYV2 358 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 GDAP2Q9NXN4 497 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 SUN2Q9UH99 717 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 POLG2Q9UHN1 485 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 LCTP09848 1927 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 XPNPEP2O43895 674 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 CAPN15O75808 1086 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 UMPSP11172 480 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 MTHFRP42898 656 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 CBX2Q14781 532 aaPredicted RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 HECTD2Q5U5R9 776 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 RBM23Q86U06 439 aaKnown RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 UNC93AQ86WB7 457 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 ABI1Q8IZP0 508 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 BPIFB1Q8TDL5 484 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 NODALQ96S42 347 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.41■□□□□ 0.223e-7■■■□□ 15.3
TPM1-228ENST00000560975 FAM118AQ9NWS6 357 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 PAK1IP1Q9NWT1 392 aaPredicted RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 TIMM22Q9Y584 194 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 PMF1-BGLAPU3KQ54 211 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 CITO14578 2027 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 A0A1B0GTL3 188 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 MYL3P08590 195 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 SEPHS1P49903 392 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 TKTL1P51854 596 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 IFITM2Q01629 132 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 DGCR6Q14129 220 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 AASDHQ4L235 1098 aaPredicted RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 NOL9Q5SY16 702 aaKnown RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 CATSPEREQ5SY80 951 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 CATSPERGQ6ZRH7 1159 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 PTRH1Q86Y79 214 aaKnown RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 PHYKPLQ8IUZ5 450 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 PTERQ96BW5 349 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 ZNF419Q96HQ0 510 aaPredicted RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 MIR1-1HGQ9H1L0 117 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 RMND5AQ9H871 391 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 SDR39U1Q9NRG7 319 aaPredicted RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 DDIT4Q9NX09 232 aa16.41■□□□□ 0.22
TPM1-228ENST00000560975 PNMA8BQ9ULN7 279 aaPredicted RBP16.41■□□□□ 0.22
TPM1-228ENST00000560975 A0A1W2PP18 115 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 C1RP00736 705 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 PAMP19021 973 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 HNRNPFP52597 415 aaKnown RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 CDKN2DP55273 166 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 UFM1P61960 85 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 GALNT1Q10472 559 aaPredicted RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 PFKFB4Q16877 469 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ISCA2Q86U28 154 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 AKAP14Q86UN6 197 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ZNF555Q8NEP9 628 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 TRMOQ9BU70 441 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 FSD1LQ9BXM9 530 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 AMBRA1Q9C0C7 1298 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 AASSQ9UDR5 926 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 TMA7Q9Y2S6 64 aaKnown RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 NRCAMQ92823 1304 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ZNF99A8MXY4 864 aaPredicted RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 TGFBR1P36897 503 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 MAP2K4P45985 399 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 CCDC81Q6ZN84 652 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 PAGE2Q7Z2X7 111 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 CYP2U1Q7Z449 544 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 NT5C3BQ969T7 300 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 VMP1Q96GC9 406 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 DACH2Q96NX9 599 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 TP63Q9H3D4 680 aaPredicted RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 SLC52A3Q9NQ40 469 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 GJD2Q9UKL4 321 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 AAR2Q9Y312 384 aaKnown RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 UBXN8O00124 270 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 CRCPO75575 148 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 SOAT2O75908 522 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 CNTN5O94779 1100 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms