RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 V9GYY5 206 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 SHROOM3Q8TF72 1996 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 F5H423 210 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GOLGA8MH3BSY2 632 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 KPNA3O00505 521 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GAPDHSO14556 408 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 AURKAO14965 403 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 LATO43561 262 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TSPAN6O43657 245 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PLRG1O43660 514 aaKnown RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SPAG6O75602 509 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TCEA3O75764 348 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 APBB3O95704 486 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CRTAMO95727 393 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 IL1BP01584 269 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CYP2A6P11509 494 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TPH1P17752 444 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PGAM1P18669 254 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 LPOP22079 712 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 NFKBIAP25963 317 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 MGAT1P26572 445 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TEAD1P28347 426 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 VIPR1P32241 457 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ELK3P41970 407 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CXCL12P48061 93 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 LMAN1P49257 510 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TPMTP51580 245 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CCR3P51677 355 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SESN2P58004 480 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 XIAPP98170 497 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PDE1BQ01064 536 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 DPTQ07507 201 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ELP6Q0PNE2 266 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PDIA2Q13087 525 aaKnown RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GALNT3Q14435 633 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 HLTFQ14527 1009 aaKnown RBP eCLIP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 FASTKD3Q14CZ7 662 aaKnown RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 RASA2Q15283 850 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 UAP1Q16222 522 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CNGA3Q16281 694 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PCSK7Q16549 785 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 BBS9Q3SYG4 887 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CRTC2Q53ET0 693 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TBCELQ5QJ74 424 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SYCP2LQ5T4T6 812 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ZDHHC20Q5W0Z9 365 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 KIAA0930Q6ICG6 404 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 LIPIQ6XZB0 460 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 UNC5AQ6ZN44 842 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 USP45Q70EL2 814 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ZNF765Q7L2R6 523 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GALNT7Q86SF2 657 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TTC7BQ86TV6 843 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ANKMY2Q8IV38 441 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CNTN4Q8IWV2 1026 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 NRSN1Q8IZ57 195 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 MAML2Q8IZL2 1156 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 IQCKQ8N0W5 287 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 RYBPQ8N488 228 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SLC25A41Q8N5S1 370 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 DNAAF3Q8N9W5 541 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GPR150Q8NGU9 434 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GRIN3AQ8TCU5 1115 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 STYXQ8WUJ0 223 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ANKRD7Q92527 254 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 UTP4Q969X6 686 aaKnown RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 STAMBPL1Q96FJ0 436 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CDKN2AIPNLQ96HQ2 116 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ZNF778Q96MU6 729 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TTC25Q96NG3 672 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 FCRL3Q96P31 734 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 MCMBPQ9BTE3 642 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 TMEM109Q9BVC6 243 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PCED1AQ9H1Q7 454 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SEMA4AQ9H3S1 761 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ZFYVE1Q9HBF4 777 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SGK2Q9HBY8 427 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 LRRC4CQ9HCJ2 640 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 PREBQ9HCU5 417 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 NEUROD4Q9HD90 331 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 CHRAC1Q9NRG0 131 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 NLE1Q9NVX2 485 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 POLR3BQ9NW08 1133 aaPredicted RBP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SYBUQ9NX95 663 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 FBXL12Q9NXK8 326 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 KCTD5Q9NXV2 234 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 NINJ2Q9NZG7 142 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
ZEB1-220ENST00000560909 SERGEFQ9UGK8 458 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 FETUBQ9UGM5 382 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 ZNF711Q9Y462 761 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 GPR179Q6PRD1 2367 aa5.46□□□□□ -1.54
ZEB1-220ENST00000560909 MIA3Q5JRA6 1907 aa5.45□□□□□ -1.54
ZEB1-220ENST00000560909 KNL1Q8NG31 2342 aa5.45□□□□□ -1.54
ZEB1-220ENST00000560909 ATG2BQ96BY7 2078 aa5.45□□□□□ -1.54
ZEB1-220ENST00000560909 TRBV5-4A0A0C4DH59 114 aa5.45□□□□□ -1.54
ZEB1-220ENST00000560909 A0A1W2PP55 124 aa5.45□□□□□ -1.54
ZEB1-220ENST00000560909 TCRBV21S2A2A0A5A6 115 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms