RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PRKAA1Q13131 559 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ARL13AQ5H913 290 aaPredicted RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 PAQR3Q6TCH7 311 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 FAM151BQ6UXP7 276 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 SERPINA9Q86WD7 417 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 RBFAQ8N0V3 343 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 LSMEM2Q8N112 164 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 NKAPQ8N5F7 415 aaKnown RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 ZNF781Q8N8C0 355 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 PTERQ96BW5 349 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 GPR21Q99679 349 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ILKAPQ9H0C8 392 aaPredicted RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 CDH19Q9H159 772 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ALG9Q9H6U8 611 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ASB8Q9H765 288 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ZFP14Q9HCL3 533 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 HPS4Q9NQG7 708 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 TXLNGQ9NUQ3 528 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 DEC1Q9P2X7 70 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 DKK3Q9UBP4 350 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 B4GALT6Q9UBX8 382 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 CDH22Q9UJ99 828 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 FAM50BQ9Y247 325 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 NEMP2A6NFY4 417 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 H3BMM5 538 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 LINC01565O15544 149 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 GPR39O43194 453 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 ZNF30P17039 623 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 KCNA5P22460 613 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ACRV1P26436 265 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 MAGEA9P43362 315 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 KCNC1P48547 511 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ST8SIA6P61647 398 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 GALNT1Q10472 559 aaPredicted RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 TUBB3Q13509 450 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 TANGO2Q6ICL3 276 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 VITQ6UXI7 678 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 TRIM67Q6ZTA4 783 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 GPR26Q8NDV2 337 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 CD200R1Q8TD46 325 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 DTX3LQ8TDB6 740 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 SGF29Q96ES7 293 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 CNDP1Q96KN2 507 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 ATOH8Q96SQ7 321 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 APOL5Q9BWW9 433 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
SNX1-211ENST00000560829 TRMT6Q9UJA5 497 aaKnown RBP12.82□□□□□ -0.36
SNX1-211ENST00000560829 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 PRRT4C9JH25 899 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 FCHO1O14526 889 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 CCDC22O60826 627 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 NIPSNAP2O75323 286 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 LEFTY1O75610 366 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 TSPAN12O95859 305 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 CHRNGP07510 517 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 CTSLP07711 333 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 C1SP09871 688 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 T-ENOLP0DO92 83 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 CYP2A6P11509 494 aaPredicted RBP12.81□□□□□ -0.36
SNX1-211ENST00000560829 NFKBIAP25963 317 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 SLC6A11P48066 632 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 ZBTB16Q05516 673 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 KRT72Q14CN4 511 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 CHRNA6Q15825 494 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 UGT3A1Q6NUS8 523 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 ASRGL1Q7L266 308 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 ALYREFQ86V81 257 aaKnown RBP12.81□□□□□ -0.36
SNX1-211ENST00000560829 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 TIFAQ96CG3 184 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 L3HYPDHQ96EM0 354 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 TMEM237Q96Q45 408 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 EBF4Q9BQW3 602 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 TUBB6Q9BUF5 446 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 NMUR2Q9GZQ4 415 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 GALPQ9UBC7 116 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 SORCS3Q9UPU3 1222 aa12.81□□□□□ -0.36
SNX1-211ENST00000560829 CFAP73A6NFT4 308 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 UPK3BL1B0FP48 263 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 UPK3BL2E5RIL1 263 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 SLCO1B7G3V0H7 640 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 MATN2O00339 956 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 HNRNPCL1O60812 293 aaKnown RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 KERAO60938 352 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 SERPINA6P08185 405 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 TPBGLP0DKB5 382 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 IMPDH1P20839 514 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 SP100P23497 879 aaPredicted RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 VIPR1P32241 457 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 BMP8BP34820 402 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 CA5AP35218 305 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms