RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MEX3CQ5U5Q3 659 aaKnown RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 REP15Q6BDI9 236 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 XRRA1Q6P2D8 792 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 GALNT18Q6P9A2 607 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 TUBA3EQ6PEY2 450 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ATG14Q6ZNE5 492 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PLEKHG7Q6ZR37 379 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PRSS48Q7RTY5 328 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 DHFR2Q86XF0 187 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 XYLT1Q86Y38 959 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SIAH1Q8IUQ4 282 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 BRSK2Q8IWQ3 736 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 IQCF2Q8IXL9 164 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PEX5LQ8IYB4 626 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 CADM3Q8N126 398 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SFRP1Q8N474 314 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 WDTC1Q8N5D0 677 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 DHRSXQ8N5I4 330 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 TMCO5AQ8N6Q1 288 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PLD5Q8N7P1 536 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PAPD5Q8NDF8 572 aaKnown RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ABHD11Q8NFV4 315 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 JOSD2Q8TAC2 188 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PMM1Q92871 262 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 CENPNQ96H22 339 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SH3YL1Q96HL8 342 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 UBXN10Q96LJ8 280 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 TSNARE1Q96NA8 513 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 GPR101Q96P66 508 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 CPXM1Q96SM3 734 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 CYP2S1Q96SQ9 504 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 MMP19Q99542 508 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SLC29A1Q99808 456 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 CIB1Q99828 191 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ARPC5LQ9BPX5 153 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 HOPXQ9BPY8 73 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SLC25A23Q9BV35 468 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 GATA5Q9BWX5 397 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SEZ6LQ9BYH1 1024 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 TRIM8Q9BZR9 551 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 HOXD1Q9GZZ0 328 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SEMA6CQ9H3T2 930 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 EHD1Q9H4M9 534 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 GPRC5CQ9NQ84 441 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 PDLIM7Q9NR12 457 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SNX15Q9NRS6 342 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 AGPAT4Q9NRZ5 378 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 C20orf96Q9NUD7 363 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 INTS10Q9NVR2 710 aaKnown RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 MTMR10Q9NXD2 777 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SMPD3Q9NY59 655 aaPredicted RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 GPRC5DQ9NZD1 345 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 NPAP1Q9NZP6 1156 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ABCD2Q9UBJ2 740 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 GTF2IRD1Q9UHL9 959 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ZNF639Q9UID6 485 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 AGO2Q9UKV8 859 aaKnown RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SATB2Q9UPW6 733 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 NOX1Q9Y5S8 564 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 SNX13Q9Y5W8 968 aa5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 COPG1Q9Y678 874 aaKnown RBP5.96□□□□□ -1.46
SNRPA1-209ENST00000560307 ILVBLA1L0T0 632 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 MAGEB16A2A368 324 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 EVPLLA8MZ36 301 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 AP3B1O00203 1094 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 PLOD2O00469 737 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 VWA5AO00534 786 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 SOCS2O14508 198 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 ACOX3O15254 700 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 CFLARO15519 480 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 MRPS14O60783 128 aaKnown RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 GMNNO75496 209 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 BBOX1O75936 387 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 PRAMEF1O95521 474 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 TOP3BO95985 862 aaKnown RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 HPRP00739 348 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 POLBP06746 335 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 APRTP07741 180 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 NAT1P18440 290 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 ITIH1P19827 911 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 PSMA4P25789 261 aaKnown RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 RBL1P28749 1068 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 CD40LGP29965 261 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 HOXA10P31260 410 aaPredicted RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 IDUAP35475 653 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 GNALP38405 381 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 ARCN1P48444 511 aaKnown RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 TRPC1P48995 793 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 DNAJB13P59910 316 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 PHC1P78364 1004 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 GALNT1Q10472 559 aaPredicted RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 NFIAQ12857 509 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 ILF2Q12905 390 aaKnown RBP5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 SELENBP1Q13228 472 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 SLC12A1Q13621 1099 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 STILQ15468 1287 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 SMTNL2Q2TAL5 461 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 PPM1LQ5SGD2 360 aa5.95□□□□□ -1.46
SNRPA1-209ENST00000560307 SLC35F1Q5T1Q4 408 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms