RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 C14orf28Q4W4Y0 310 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 PYCR3Q53H96 274 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 DARS2Q6PI48 645 aaKnown RBP11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 CDKL3Q8IVW4 592 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 RAVER1Q8IY67 606 aaKnown RBP11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 SYCE1Q8N0S2 351 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 TTC30BQ8N4P2 665 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 UBL4BQ8N7F7 174 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 Q8N9G6 341 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 CCDC110Q8TBZ0 833 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 NXPE2Q96DL1 559 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 HES6Q96HZ4 224 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 DEPDC7Q96QD5 511 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 OR2M4Q96R27 311 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 GBA3Q9H227 469 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 DKK4Q9UBT3 224 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 TRHDEQ9UKU6 1024 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 TMPRSS11EQ9UL52 423 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 GUCA1BQ9UMX6 200 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 AK5Q9Y6K8 562 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 RNF215Q9Y6U7 377 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 A0A1W2PQM1 296 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 MIF4GDA9UHW6 222 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 BUD23O43709 281 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 TLX3O43711 291 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 BRINP1O60477 761 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 DNAJC6O75061 913 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 USP12O75317 370 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ECEL1O95672 775 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 EML2O95834 649 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 EPOP01588 193 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 MPOP05164 745 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 PYGLP06737 847 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 PSMB4P28070 264 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 DCDC1P59894 354 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 KLF1Q13351 362 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 SLC1A5Q15758 541 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 KHDC1Q4VXA5 237 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ANKRD20A2Q5SQ80 823 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 CERCAMQ5T4B2 595 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ANKRD20A1Q5TYW2 823 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ANKRD20A3Q5VUR7 823 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 CCDC70Q6NSX1 233 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 RBM44Q6ZP01 1051 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ZDHHC1Q8WTX9 485 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ATXN7L3BQ96GX2 97 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 APOL2Q9BQE5 337 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 FICDQ9BVA6 458 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 GSDMCQ9BYG8 508 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 NRSN2Q9GZP1 204 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ZNHIT2Q9UHR6 403 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 RALYQ9UKM9 306 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 ENTPD2Q9Y5L3 495 aa11.55□□□□□ -0.56
RABGGTA-216ENST00000560243 NTN3O00634 580 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ARHGAP6O43182 974 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 GPR39O43194 453 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 RPLP0P05388 317 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 GLB1P16278 677 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ZNF8P17098 575 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CA5AP35218 305 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ADRA1AP35348 466 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CETN2P41208 172 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ACTR1BP42025 376 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ACTR1AP61163 376 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CCZ1BP86790 482 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 MPP3Q13368 585 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CHST15Q7LFX5 561 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 B3GNT8Q7Z7M8 397 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 C17orf82Q86X59 251 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 GALNT13Q8IUC8 556 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CCNJLQ8IV13 435 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 NAGSQ8N159 534 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 RNF10Q8N5U6 811 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 FAM71DQ8N9W8 422 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 BLOC1S5Q8TDH9 187 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ATG4AQ8WYN0 398 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 SPATA13Q96N96 652 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 FOXP3Q9BZS1 431 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 CDH19Q9H159 772 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 OR2AG1Q9H205 316 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 IL26Q9NPH9 171 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 VPS18Q9P253 973 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 LRIT1Q9P2V4 623 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ATXN10Q9UBB4 475 aa11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 NFKBIL1Q9UBC1 381 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 ATXN7L1Q9ULK2 861 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-216ENST00000560243 IGSF10Q6WRI0 2623 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TRBV23OR9-2A0A075B6M9 112 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 B4GAT1O43505 415 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 MTX2O75431 263 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TCEA3O75764 348 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ANXA9O76027 345 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 SLC25A14O95258 325 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms