RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PADI1Q9ULC6 663 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 FZD10Q9ULW2 581 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 PCDHGC4Q9Y5F7 938 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 A0A0U1RQS6 177 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 NPIPB15A6NHN6 443 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 ARHGAP42A6NI28 874 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SPAG6O75602 509 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 CYP1A1P04798 512 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 KRT3P12035 628 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 GPD1P21695 349 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 GRNP28799 593 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SEPHS1P49903 392 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 CCL11P51671 97 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 AP1S1P61966 158 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 IL11RAQ14626 422 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 UGT8Q16880 541 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC9B2Q86UD5 537 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC30A5Q8TAD4 765 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC20A1Q8WUM9 679 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 THAP4Q8WY91 577 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 C19orf60Q96EN9 201 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 C5orf34Q96MH7 638 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 NAA15Q9BXJ9 866 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 STN1Q9H668 368 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC5A6Q9Y289 635 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 PRKAB1Q9Y478 270 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 DOCK10Q96BY6 2186 aa12.68□□□□□ -0.38
RABGGTA-213ENST00000560127 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 LILRA5A6NI73 299 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 C21orf140B9A014 251 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 CCP110O43303 1012 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 KRT86O43790 486 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 DNAJC6O75061 913 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 CBX6O95503 412 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 CPP00450 1065 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 CYP2A6P11509 494 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 FGF5P12034 268 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 NFKBIAP25963 317 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 TPI1P60174 286 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 IL10RAQ13651 578 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 LAMB3Q13751 1172 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 NR6A1Q15406 480 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 KLHDC7AQ5VTJ3 777 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ARHGAP12Q8IWW6 846 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC34A3Q8N130 599 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 LZTR1Q8N653 840 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 RBMXL3Q8N7X1 1067 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 SCAMP4Q969E2 229 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 AP2M1Q96CW1 435 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 COX14Q96I36 57 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 PSKH2Q96QS6 385 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 AGAP2Q99490 1192 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 HERPUD2Q9BSE4 406 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 BRD8Q9H0E9 1235 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ING2Q9H160 280 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ABCG8Q9H221 673 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 AKIRIN1Q9H9L7 192 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 SLAMF7Q9NQ25 335 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ACSS2Q9NR19 701 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 CPNE7Q9UBL6 633 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 CNOT8Q9UFF9 292 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ZNHIT2Q9UHR6 403 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 NOCTQ9UK39 431 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 PHTF1Q9UMS5 762 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 KCNK6Q9Y257 313 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 ZNF451Q9Y4E5 1061 aa12.67□□□□□ -0.38
RABGGTA-213ENST00000560127 A0A1W2PQ67 120 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 DPM1O60762 260 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 SOCS5O75159 536 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 LRCH4O75427 683 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 CEACAM4O75871 244 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TIAF1O95411 115 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 MT-ND3P03897 115 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 F3P13726 295 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TYRP1P17643 537 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 CHRNB2P17787 502 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 VARSP26640 1264 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 LEPRP48357 1165 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 UBE2IP63279 158 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 FMO1Q01740 532 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 IL10RBQ08334 325 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC10A7Q0GE19 358 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TRAF2Q12933 501 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 RFTN1Q14699 578 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 CHRNA6Q15825 494 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC6A19Q695T7 634 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 CHST15Q7LFX5 561 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TTC13Q8NBP0 860 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms