RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ESR1P03372 595 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 URODP06132 367 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PIRTP0C851 137 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MBL2P11226 248 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PFKLP17858 780 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 LBPP18428 481 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 RPL17P18621 184 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 LAG3P18627 525 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 GPX3P22352 226 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 FMO4P31512 558 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MC4RP32245 332 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 DPP6P42658 865 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 SGSHP51688 502 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 EPHB3P54753 998 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PKNOX1P55347 436 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 SH3BP2P78314 561 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 CACNG1Q06432 222 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 FOXM1Q08050 763 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TRIM25Q14258 630 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PTPRCAPQ14761 206 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TRIP10Q15642 601 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PTPRNQ16849 979 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PFKFB4Q16877 469 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MMEL1Q495T6 779 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 SAMD4BQ5PRF9 694 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MPP7Q5T2T1 576 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 LYPLAL1Q5VWZ2 237 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TICAM1Q8IUC6 712 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PHYKPLQ8IUZ5 450 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 CPXM2Q8N436 756 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 PCYOX1LQ8NBM8 494 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TWIST2Q8WVJ9 160 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF689Q96CS4 500 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM169Q96HH4 297 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 SCLYQ96I15 445 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 ZFRQ96KR1 1074 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MARK4Q96L34 752 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 BIRC8Q96P09 236 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TRAPPC9Q96Q05 1148 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 GPR21Q99679 349 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 NPAS2Q99743 824 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 FAM192AQ9GZU8 254 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 Q9H521 79 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MID1IP1Q9NPA3 183 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 GKN1Q9NS71 199 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 NUDT4Q9NZJ9 180 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 TRMT6Q9UJA5 497 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 RIMS3Q9UJD0 308 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 LSM7Q9UK45 103 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 CNOT11Q9UKZ1 510 aaKnown RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 FIS1Q9Y3D6 152 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF711Q9Y462 761 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 MTF2Q9Y483 593 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-212ENST00000559937 DTNAQ9Y4J8 743 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 OR51B4Q9Y5P0 310 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 INSL5Q9Y5Q6 135 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 ANKRD12Q6UB98 2062 aa8.04□□□□□ -1.12
SMAD3-212ENST00000559937 ABHD14A-ACY1A0A1B0GW23 586 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DPPA5A6NC42 116 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 C2orf78A6NCI8 922 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 GRXCR2A6NFK2 248 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 H0Y626 953 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PRMT5O14744 637 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PIP5K1BO14986 540 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CFLARO15519 480 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DENRO43583 198 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 AP1G1O43747 822 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 GREM1O60565 184 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 TSPAN3O60637 253 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PQBP1O60828 265 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 EFCAB14O75071 495 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SOCS5O75159 536 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ECI2O75521 394 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SORBS2O94875 1100 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 STAMBPO95630 424 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 TSPAN12O95859 305 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CHEK2O96017 543 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 LYNP07948 512 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 LINGO3P0C6S8 592 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PRR35P0CG20 571 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 UROSP10746 265 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 IRF1P10914 325 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 IDO1P14902 403 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PEX2P28328 305 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 EEF1DP29692 281 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 HMGCLP35914 325 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PTPN5P54829 565 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 IL2P60568 153 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 RHOAP61586 193 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MRPS22P82650 360 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SMAD3P84022 425 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MS4A2Q01362 244 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CLCQ05315 142 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MED21Q13503 144 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CRY1Q16526 586 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SFT2D3Q587I9 215 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ZRANB3Q5FWF4 1079 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 XKR7Q5GH72 579 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms