RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CYLC1P35663 651 aaPredicted RBP17.61■□□□□ 0.41
TPM1-218ENST00000559281 RHDQ02161 417 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 PCSK7Q16549 785 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 TFDP3Q5H9I0 405 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 ARHGAP40Q5TG30 622 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 TMEM164Q5U3C3 297 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 KAZNQ674X7 775 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 CHST15Q7LFX5 561 aaPredicted RBP17.61■□□□□ 0.41
TPM1-218ENST00000559281 LYSMD3Q7Z3D4 306 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 SLITRK4Q8IW52 837 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 TC2NQ8N9U0 490 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 SLC39A7Q92504 469 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 P3H4Q92791 437 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 TEKT5Q96M29 485 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 TRIB3Q96RU7 358 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 WDR24Q96S15 920 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 ZSCAN5AQ9BUG6 496 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 SPATA16Q9BXB7 569 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 GPR63Q9BZJ6 419 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 STN1Q9H668 368 aaKnown RBP17.61■□□□□ 0.41
TPM1-218ENST00000559281 RDH14Q9HBH5 336 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 CPNE5Q9HCH3 593 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 ACSL6Q9UKU0 697 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 CNOT6Q9ULM6 557 aaKnown RBP17.61■□□□□ 0.41
TPM1-218ENST00000559281 SSUH2Q9Y2M2 353 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 PLEKHM1Q9Y4G2 1056 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 PCDHA13Q9Y5I0 950 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 ST14Q9Y5Y6 855 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 PTPRQQ9UMZ3 2332 aa17.61■□□□□ 0.41
TPM1-218ENST00000559281 IGSF10Q6WRI0 2623 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 PPM1DO15297 605 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 DNAJC6O75061 913 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SLC25A14O95258 325 aaPredicted RBP17.6■□□□□ 0.41
TPM1-218ENST00000559281 LCA5LO95447 670 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 NDST3O95803 873 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 HGFP14210 728 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SLC2A4P14672 509 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 CD1CP29017 333 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 GPLD1P80108 840 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SQSTM1Q13501 440 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 TRA2AQ13595 282 aaKnown RBP eCLIP17.6■□□□□ 0.41
TPM1-218ENST00000559281 TAZQ16635 292 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 PDPK2PQ6A1A2 396 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SPOCD1Q6ZMY3 1216 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 CCDC81Q6ZN84 652 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 PATE1Q8WXA2 126 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SH3KBP1Q96B97 665 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 TADA1Q96BN2 335 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
TPM1-218ENST00000559281 VAT1Q99536 393 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 B3GNT4Q9C0J1 378 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 CARD9Q9H257 536 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SEMA6CQ9H3T2 930 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 WDR70Q9NW82 654 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 KCNK4Q9NYG8 393 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
TPM1-218ENST00000559281 SHROOM3Q8TF72 1996 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 FADS2P1A8MWK0 482 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 GPR89AB7ZAQ6 455 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 ERVH48-1M5A8F1 160 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 GRID2O43424 1007 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 GPR89BP0CG08 455 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 PTPN3P26045 913 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 FASLGP48023 281 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 PPM1FP49593 454 aaPredicted RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 DCDC1P59894 354 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 CLN3Q13286 438 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 PRKD1Q15139 912 aaPredicted RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 TAF1BQ53T94 588 aaPredicted RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 ZNF569Q5MCW4 686 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 CCDC50Q8IVM0 306 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 KATNAL2Q8IYT4 538 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 SFRP1Q8N474 314 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 OR4D9Q8NGE8 314 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 SNRNP27Q8WVK2 155 aaKnown RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 AHCYL2Q96HN2 611 aaKnown RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 CCNL2Q96S94 520 aaPredicted RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 SLC38A3Q99624 504 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 TRIM39Q9HCM9 518 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 SAE1Q9UBE0 346 aaPredicted RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 FAM153AQ9UHL3 310 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 ZNF711Q9Y462 761 aa17.59■□□□□ 0.41
TPM1-218ENST00000559281 OAS3Q9Y6K5 1087 aaKnown RBP17.59■□□□□ 0.41
TPM1-218ENST00000559281 TRBV23OR9-2A0A075B6M9 112 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 IGHV1OR21-1A0A087WYE8 117 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 OR5K4A6NMS3 321 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 K7ENP7 123 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 NUAK1O60285 661 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 PMPCBO75439 489 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 MT-CYBP00156 380 aaPredicted RBP17.58■□□□□ 0.4
TPM1-218ENST00000559281 EPOP01588 193 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 PIRTP0C851 137 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 ITIH1P19827 911 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 LIMK2P53671 638 aa17.58■□□□□ 0.4
TPM1-218ENST00000559281 MAPK10P53779 464 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms