RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NLRP8Q86W28 1048 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 SFTPA2Q8IWL1 248 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 PIANPQ8IYJ0 282 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 MINDY1Q8N5J2 469 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 TRAM1L1Q8N609 369 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 CCHCR1Q8TD31 782 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 SEC14L1Q92503 715 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 TSACCQ96A04 125 aaPredicted RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 LRRC45Q96CN5 670 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 MFSD3Q96ES6 412 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 SNF8Q96H20 258 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 CDKN2AIPNLQ96HQ2 116 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 RUNDC3BQ96NL0 473 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 PLEKHG4BQ96PX9 1271 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 GTPBP2Q9BX10 602 aaKnown RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 SPATA16Q9BXB7 569 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 WDR26Q9H7D7 661 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 UCKL1Q9NWZ5 548 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 IL1RAPL1Q9NZN1 696 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 MARCH4Q9P2E8 410 aaPredicted RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 PLEKHM1Q9Y4G2 1056 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 DMXL1Q9Y485 3027 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 CEP250Q9BV73 2442 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 GLYATL1P3A0A0U1RQE8 302 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 CTAGE15A4D2H0 777 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 RGSL1A5PLK6 1076 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 AGAP14A8MT82 685 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 PRR5-ARHGAP8B1AHC4 643 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 H7C0S8 307 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 STX7O15400 261 aaKnown RBP10.81□□□□□ -0.68
TPM1-217ENST00000559108 SGTAO43765 313 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 SRP72O76094 671 aaKnown RBP10.81□□□□□ -0.68
TPM1-217ENST00000559108 PRAMEF1O95521 474 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 CTAGE8P0CG41 777 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 ADRA1DP25100 572 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 NFKBIAP25963 317 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 MC4RP32245 332 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 RABIFP47224 123 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 YPEL5P62699 121 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 PCID2Q5JVF3 399 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 C8orf74Q6P047 294 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 DOK6Q6PKX4 331 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 LDB1Q86U70 411 aaPredicted RBP10.81□□□□□ -0.68
TPM1-217ENST00000559108 CTAGE6Q86UF2 777 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 HOOK3Q86VS8 718 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 GATAD2AQ86YP4 633 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 CTAGE4Q8IX94 777 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 RAVER1Q8IY67 606 aaKnown RBP10.81□□□□□ -0.68
TPM1-217ENST00000559108 KIAA2013Q8IYS2 634 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 SLC25A45Q8N413 288 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 CCL4L1Q8NHW4 92 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 CEP76Q8TAP6 659 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 GLYATL1Q969I3 302 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 EDEM2Q9BV94 578 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 LRRC61Q9BV99 259 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 KIFC1Q9BW19 673 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 C1QTNF7Q9BXJ2 289 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 CLPBQ9H078 707 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 GAREM1Q9H706 876 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 TM7SF3Q9NS93 570 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 ZDHHC18Q9NUE0 388 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 SOX13Q9UN79 622 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 SLC17A4Q9Y2C5 497 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 BTBD3Q9Y2F9 522 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 PRKAB1Q9Y478 270 aa10.81□□□□□ -0.68
TPM1-217ENST00000559108 ARHGEF17Q96PE2 2063 aaPredicted RBP10.81□□□□□ -0.68
TPM1-217ENST00000559108 COL27A1Q8IZC6 1860 aaPredicted RBP10.81□□□□□ -0.68
TPM1-217ENST00000559108 TRBV5-4A0A0C4DH59 114 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 A0A1B0GTQ1 180 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 ZCWPW2A0A1B0GU75 182 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 HEATR9A2RTY3 570 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 C2orf81A6NN90 581 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 GOLGA8KD6RF30 607 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 GOLGA8TH3BQL2 631 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 DNAJC6O75061 913 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 CRTAMO95727 393 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 GOT2P00505 430 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 HOXC4P09017 264 aaPredicted RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 MLNP12872 115 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 CD59P13987 128 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 NME1P15531 152 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 EPHA8P29322 1005 aaPredicted RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 DPP6P42658 865 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 TNNT3P45378 269 aaPredicted RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 ARCN1P48444 511 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 NPY2RP49146 381 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 C21orf59P57076 290 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 OVGP1Q12889 678 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 MORF4L2Q15014 288 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 TEAD4Q15561 434 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 GPRC6AQ5T6X5 926 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 ENPP7Q6UWV6 458 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 MARK2Q7KZI7 788 aaKnown RBP10.8□□□□□ -0.68
TPM1-217ENST00000559108 ADGRG6Q86SQ4 1221 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 PARGQ86W56 976 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 ZNF547Q8IVP9 402 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 FBXO25Q8TCJ0 367 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 STYXQ8WUJ0 223 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 BTN2A2Q8WVV5 523 aa10.8□□□□□ -0.68
TPM1-217ENST00000559108 ART4Q93070 314 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms