RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SMU1Q2TAY7 513 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 EIF2S3LQ2VIR3 472 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CBWD6Q4V339 395 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 FAM98BQ52LJ0 330 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 NHSL2Q5HYW2 709 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CBWD3Q5JTY5 395 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 EPHA10Q5JZY3 1008 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 IGFL4Q6B9Z1 124 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 FCRLBQ6BAA4 426 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM71Q6P5X7 295 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SLC36A4Q6YBV0 504 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 RBPMS2Q6ZRY4 209 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ZBTB49Q6ZSB9 765 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 INTS8Q75QN2 995 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 TRILQ7L0X0 811 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 DET1Q7L5Y6 550 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 PATL1Q86TB9 770 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 LDB1Q86U70 411 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM173Q86WV6 379 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ANKRD13BQ86YJ7 626 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 RBFAQ8N0V3 343 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SPATA6LQ8N4H0 392 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CARNMT1Q8N4J0 409 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 C10orf53Q8N6V4 93 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MIGA1Q8NAN2 632 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 C8orf58Q8NAV2 365 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 XXYLT1Q8NBI6 393 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 AGBL3Q8NEM8 1001 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 OR1J2Q8NGS2 313 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ARRDC2Q8TBH0 407 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 HM13Q8TCT9 377 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF398Q8TD17 642 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM174Q8WUU8 243 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CCDC47Q96A33 483 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ORAI1Q96D31 301 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SPACA9Q96E40 222 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF830Q96NB3 372 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SMC6Q96SB8 1091 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 KXD1Q9BQD3 176 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MGME1Q9BQP7 344 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 POLDIP3Q9BY77 421 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 C2orf40Q9H1Z8 148 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SLCO5A1Q9H2Y9 848 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 KCNK15Q9H427 330 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 RAD21L1Q9H4I0 556 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 DENND2DQ9H6A0 471 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 CNOT10Q9H9A5 744 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SPAG4Q9NPE6 437 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM51Q9NW97 253 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 MTMR10Q9NXD2 777 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 LARSQ9P2J5 1176 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 DNAJB4Q9UDY4 337 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 ARMCX3Q9UH62 379 aaPredicted RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 TSPYL4Q9UJ04 414 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 AGO2Q9UKV8 859 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 NFE2L3Q9Y4A8 694 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 INSL6Q9Y581 213 aa2.31□□□□□ -2.04
GABPB1-209ENST00000559100 SRPRBQ9Y5M8 271 aaKnown RBP2.31□□□□□ -2.04
GABPB1-209ENST00000559100 A0A087X1B8 175 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 A0A1W2PPC1 479 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 A0A1W2PR77 199 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 MANSC4A6NHS7 340 aaPredicted RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 CGB1A6NKQ9 187 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 A6NNC1 897 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 KCNU1A8MYU2 1149 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 M0QZ24 198 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 ITM2AO43736 263 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 STX6O43752 255 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 SYNCRIPO60506 623 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 TSPAN1O60635 241 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 PRAMEF11O60813 436 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 CELF2O95319 508 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 C22orf31O95567 290 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 THEGLP0DJG4 465 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 CYP19A1P11511 503 aaPredicted RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 PRLRP16471 622 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 TCEA1P23193 301 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 EEF1B2P24534 225 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 HOXC13P31276 330 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 PTH2RP49190 550 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 ENTPD1P49961 510 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 SNRPEP62304 92 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 CSNK2A1P68400 391 aaPredicted RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 SIRPAP78324 504 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 ID2Q02363 134 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 AP1B1Q10567 949 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 EFEMP1Q12805 493 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 HSPB3Q12988 150 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 GRIK2Q13002 908 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 SMN1Q16637 294 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 MEP1AQ16819 746 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 PIK3CD-AS1Q5SR53 167 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 SFMBT2Q5VUG0 894 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 ZDHHC20Q5W0Z9 365 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 DUS1LQ6P1R4 473 aaKnown RBP2.3□□□□□ -2.04
GABPB1-209ENST00000559100 IYDQ6PHW0 289 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 MOXD1Q6UVY6 613 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 B3GNT6Q6ZMB0 384 aa2.3□□□□□ -2.04
GABPB1-209ENST00000559100 MTSS1LQ765P7 747 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms