RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CTSL3PQ5NE16 218 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 Q6ZVU0 165 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SDCCAG8Q86SQ7 713 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 ISCA2Q86U28 154 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 C10orf67Q8IYJ2 551 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 PCDH20Q8N6Y1 951 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CHST14Q8NCH0 376 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 TUBGCP5Q96RT8 1024 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CPEB1Q9BZB8 566 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 NMUR2Q9GZQ4 415 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 FAM96AQ9H5X1 160 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 HECAQ9UBI9 543 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 TRIM33Q9UPN9 1127 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 H3BMM5 538 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 NARSO43776 548 aaKnown RBP12.88□□□□□ -0.35
SMAD3-207ENST00000558763 TULP3O75386 442 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 CD1DP15813 335 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 PMLP29590 882 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 SERPINA4P29622 427 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 DGKGP49619 791 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 NAGLUP54802 743 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 KDSRQ06136 332 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 ACAP2Q15057 778 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 AGAP9Q5VTM2 703 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 TSPAN33Q86UF1 283 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 ZNF557Q8N988 423 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-207ENST00000558763 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 GIMAP7Q8NHV1 300 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 CSGALNACT1Q8TDX6 532 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 SGF29Q96ES7 293 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 SLC2A11Q9BYW1 496 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 GALPQ9UBC7 116 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 SLC25A13Q9UJS0 675 aa12.88□□□□□ -0.35
SMAD3-207ENST00000558763 OAS3Q9Y6K5 1087 aaKnown RBP12.88□□□□□ -0.35
SMAD3-207ENST00000558763 TRBV5-4A0A0C4DH59 114 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 C1orf232A0A0U1RR37 186 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 A8MT66 165 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 WASH3PC4AMC7 463 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 FCHO1O14526 889 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ZBTB14O43829 449 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CLDN7O95471 211 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CBX6O95503 412 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CD9P21926 228 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 LHCGRP22888 699 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 TARSP26639 723 aaKnown RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SLC6A11P48066 632 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 PRKAA2P54646 552 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ADARP55265 1226 aaKnown RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 DNAJB13P59910 316 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ZP2Q05996 745 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 RCN2Q14257 317 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 PTPRNQ16849 979 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CARD16Q5EG05 197 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ADHFE1Q8IWW8 467 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ETFBKMTQ8IXQ9 262 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 AHI1Q8N157 1196 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 MAPK15Q8TD08 544 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SORCS1Q8WY21 1168 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SLC7A6OSQ96CW6 309 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CHFRQ96EP1 664 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 TMEM237Q96Q45 408 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SLC30A3Q99726 388 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 P2RY12Q9H244 342 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SUV39H2Q9H5I1 410 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ZFYVE1Q9HBF4 777 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ERVW-1Q9UQF0 538 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 MYO10Q9HD67 2058 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CAPN14A8MX76 684 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 TSPAN12O95859 305 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 BPIP17213 487 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 TFEBP19484 476 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ATP5F1P24539 256 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 MPSTP25325 297 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 FMO4P31512 558 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 TTPAP49638 278 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 KPNA2P52292 529 aaKnown RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CACNG1Q06432 222 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CRTC1Q6UUV9 634 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 PLPP6Q8IY26 295 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 PTCD3Q96EY7 689 aaKnown RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 SCRN2Q96FV2 425 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 CDH19Q9H159 772 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
SMAD3-207ENST00000558763 PKP3Q9Y446 797 aa12.87□□□□□ -0.35
SMAD3-207ENST00000558763 ANKRD12Q6UB98 2062 aa12.86□□□□□ -0.35
SMAD3-207ENST00000558763 PLXNA2O75051 1894 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms