RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PLXNB3Q9ULL4 1909 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3DA0A087WVF3 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3IA0A087WXS9 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3EA0A087X179 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3KA0A087X1G2 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3FA6NER0 549 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 HMGB1P1B2RPK0 211 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3LB9A6J9 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 F8W8V4 182 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 RNGTTO60942 597 aaKnown RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 NDUFS3O75489 264 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 SYF2O95926 243 aaKnown RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 ITGA2BP08514 1039 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3HP0C7X1 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 ZNF7P17097 686 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 CD9P21926 228 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 RPS3P23396 243 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS18-202ENST00000558474 ACRV1P26436 265 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 SGCGQ13326 291 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 LDLRAP1Q5SW96 308 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3GQ6DHY5 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3CQ6IPX1 549 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 ANO7Q6IWH7 933 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 PSAPL1Q6NUJ1 521 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 TAS2R42Q7RTR8 314 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 CCDC91Q7Z6B0 441 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 MTERF4Q7Z6M4 381 aaKnown RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 TBC1D3Q8IZP1 549 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 RBFAQ8N0V3 343 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 DENND6BQ8NEG7 585 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 ISL2Q96A47 359 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 LENG8Q96PV6 779 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 GPR22Q99680 433 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 SPATA16Q9BXB7 569 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 FAM126AQ9BYI3 521 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 SLC17A9Q9BYT1 436 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 ZDHHC3Q9NYG2 299 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 MARCH4Q9P2E8 410 aaPredicted RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 ZFR2Q9UPR6 939 aaKnown RBP14.78□□□□□ -0.04
VPS18-202ENST00000558474 PCDHB1Q9Y5F3 818 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 PSAT1Q9Y617 370 aa14.78□□□□□ -0.04
VPS18-202ENST00000558474 IGLV3-16A0A075B6K0 115 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 A0A1W2PQU0 124 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 TMEM221A6NGB7 291 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 IGLON5A6NGN9 336 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 SMIM23A6NLE4 172 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 GOLGA8CPA6NN73 597 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 H3BMM5 538 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 M0R296 226 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 UGT1A9O60656 530 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 HAUS5O94927 633 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 SEMA4FO95754 770 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 ESR1P03372 595 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 DCNP07585 359 aaKnown RBP14.77□□□□□ -0.05
VPS18-202ENST00000558474 GABRB3P28472 473 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 CD6P30203 668 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 NSG1P42857 185 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 CCR5P51681 352 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 MPP1Q00013 466 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 POU4F1Q01851 419 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 SEMA3AQ14563 771 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 LRRC14Q15048 493 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 TMED2Q15363 201 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 ATP13A5Q4VNC0 1218 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 SERPINA9Q86WD7 417 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 PIANPQ8IYJ0 282 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 DDHD1Q8NEL9 900 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 ACMSDQ8TDX5 336 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 MZB1Q8WU39 189 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 BTN2A2Q8WVV5 523 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 LPGAT1Q92604 370 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 SCAMP4Q969E2 229 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 ALKBH8Q96BT7 664 aaKnown RBP14.77□□□□□ -0.05
VPS18-202ENST00000558474 VPS39Q96JC1 886 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 CABS1Q96KC9 395 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 ATP6V1G3Q96LB4 118 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 HHIPQ96QV1 700 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.05
VPS18-202ENST00000558474 UGT1A7Q9HAW7 530 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 UGT1A10Q9HAW8 530 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 UGT1A8Q9HAW9 530 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 FBXO6Q9NRD1 293 aaPredicted RBP14.77□□□□□ -0.05
VPS18-202ENST00000558474 WSB2Q9NYS7 404 aaPredicted RBP14.77□□□□□ -0.05
VPS18-202ENST00000558474 TBK1Q9UHD2 729 aa14.77□□□□□ -0.05
VPS18-202ENST00000558474 TRPM6Q9BX84 2022 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 CFAP99D6REC4 459 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 QSOX1O00391 747 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 TOR1BO14657 336 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 PRMT5O14744 637 aaPredicted RBP14.76□□□□□ -0.05
VPS18-202ENST00000558474 LATO43561 262 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 PIAS1O75925 651 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 RALBP11234 206 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 KRT15P19012 456 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 ACSL1P33121 698 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 GPR1P46091 355 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 DBN1Q16643 649 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 FAM45BPQ6NSW5 357 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 PNCKQ6P2M8 343 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 ADAMTSL4Q6UY14 1074 aa14.76□□□□□ -0.05
VPS18-202ENST00000558474 RFLNAQ6ZTI6 216 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms