RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 C2CD6Q53TS8 623 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 TAF3Q5VWG9 929 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 SP5Q6BEB4 398 aaPredicted RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 JMJD6Q6NYC1 403 aaPredicted RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 SCYL2Q6P3W7 929 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 DOK6Q6PKX4 331 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 NLRP8Q86W28 1048 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 BPHLQ86WA6 291 aaPredicted RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 PPP1R3BQ86XI6 285 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 GALNT13Q8IUC8 556 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 RHOT1Q8IXI2 618 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 PELI3Q8N2H9 469 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 CBARPQ8N350 705 aaPredicted RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 CCDC185Q8N715 623 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 TSEN2Q8NCE0 465 aaKnown RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 GPT2Q8TD30 523 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 FAM172AQ8WUF8 416 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 HPS1Q92902 700 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 DTD2Q96FN9 168 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 C9orf72Q96LT7 481 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 FCRL4Q96PJ5 515 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 OR6C1Q96RD1 312 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 HERPUD2Q9BSE4 406 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 TRIM55Q9BYV6 548 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 RAB6CQ9H0N0 254 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 ING2Q9H160 280 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 ZNF768Q9H5H4 540 aaKnown RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 PDE7BQ9NP56 450 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 MLXIPLQ9NP71 852 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 LHX9Q9NQ69 397 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 TMEM63CQ9P1W3 806 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 B4GALT6Q9UBX8 382 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 CNOT8Q9UFF9 292 aaKnown RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 ZNHIT2Q9UHR6 403 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 CTNND2Q9UQB3 1225 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 FARSAQ9Y285 508 aaKnown RBP5.14□□□□□ -1.59
SPG11-208ENST00000558155 TMEM98Q9Y2Y6 226 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 ST14Q9Y5Y6 855 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 COL12A1Q99715 3063 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 HIVEP3Q5T1R4 2406 aa5.14□□□□□ -1.59
SPG11-208ENST00000558155 BSNQ9UPA5 3926 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ANKRD62A6NC57 917 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 GOLGA6L3A6NEY3 463 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ARGFXA6NJG6 315 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 DAPK3O43293 454 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 SNX2O60749 519 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 C9P02748 559 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 PNMA6AP0CW24 399 aaPredicted RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 FGF5P12034 268 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 KRT3P12035 628 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 DESP17661 470 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 GPD1P21695 349 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 LPOP22079 712 aaPredicted RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 PTPN4P29074 926 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 HSPA9P38646 679 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 MTIF2P46199 727 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 RGRP47804 291 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SEPHS1P49903 392 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 PAPOLAP51003 745 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 AIF1P55008 147 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 HDAC4P56524 1084 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 AP1S1P61966 158 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 IL10RBQ08334 325 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 CNGA3Q16281 694 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 UGT8Q16880 541 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.13□□□□□ -1.59
SPG11-208ENST00000558155 ZRANB3Q5FWF4 1079 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 TMCO4Q5TGY1 634 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 NAA35Q5VZE5 725 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ADAMTSL4Q6UY14 1074 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 Q6ZVL8 140 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 MARK2Q7KZI7 788 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 CHST15Q7LFX5 561 aaPredicted RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 HSD11B1LQ7Z5J1 315 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 TECPR1Q7Z6L1 1165 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SYVN1Q86TM6 617 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ZNF677Q86XU0 584 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 PYROXD2Q8N2H3 581 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 EXD1Q8NHP7 514 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 CT55Q8WUE5 264 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 PDCD6IPQ8WUM4 868 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 PNPLA2Q96AD5 504 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 AP2M1Q96CW1 435 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SCRN2Q96FV2 425 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ZDHHC12Q96GR4 267 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 TCTN2Q96GX1 697 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 CELF6Q96J87 481 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 ELMO2Q96JJ3 720 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 MRGPRX2Q96LB1 330 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SELENOOQ9BVL4 669 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 TBC1D10AQ9BXI6 508 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SLC39A8Q9C0K1 460 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ABCG8Q9H221 673 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ACTL8Q9H568 366 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 LRRC19Q9H756 370 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 RMI1Q9H9A7 625 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 UCK1Q9HA47 277 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SP110Q9HB58 689 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms