RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 NAP1L1P55209 391 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 WNT3AP56704 352 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 CTBSQ01459 385 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 ILF3Q12906 894 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 NOMO1Q15155 1222 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 PCSK7Q16549 785 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 C14orf28Q4W4Y0 310 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 PYCR3Q53H96 274 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 KDELC1Q6UW63 502 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 ZNF567Q8N184 647 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 WDR48Q8TAF3 677 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 KIAA1524Q8TCG1 905 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 CCHCR1Q8TD31 782 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 HTR3CQ8WXA8 447 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 ALG3Q92685 438 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 FGF11Q92914 225 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 GRAMD1AQ96CP6 724 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 ATXN7L3BQ96GX2 97 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 PRR11Q96HE9 360 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 VAT1Q99536 393 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 GSDMCQ9BYG8 508 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 OSBPL8Q9BZF1 889 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 LRRN3Q9H3W5 708 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 DPEP2Q9H4A9 486 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 C10orf88Q9H8K7 445 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 POLR1BQ9H9Y6 1135 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 ZFYVE1Q9HBF4 777 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 PKD2L2Q9NZM6 624 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 TAAR2Q9P1P5 351 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 IMPACTQ9P2X3 320 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 FAM153AQ9UHL3 310 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 SHOC2Q9UQ13 582 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 ZNF711Q9Y462 761 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 OAS3Q9Y6K5 1087 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 RNF215Q9Y6U7 377 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 CCDC66A2RUB6 948 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 PMS2P1A4D2B8 440 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 APOC4-APOC2K7ER74 178 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 AURKAO14965 403 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 NUDT21O43809 227 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 DNAJC6O75061 913 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 DXOO77932 396 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 EPOP01588 193 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 APOC2P02655 101 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 ATP1A1P05023 1023 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 RPLP0P05388 317 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 PYGMP11217 842 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 RBL1P28749 1068 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 PTPN7P35236 360 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 EIF2S3P41091 472 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 MAZP56270 477 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 RWDD2BP57060 319 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 GABREP78334 506 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 B4GALNT1Q00973 533 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 OTUD4Q01804 1114 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 XRCC4Q13426 336 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 SPIDRQ14159 915 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 COL28A1Q2UY09 1125 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 TBC1D25Q3MII6 688 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 AADACL2Q6P093 401 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 SLC30A9Q6PML9 568 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 MARK2Q7KZI7 788 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 PID1Q7Z2X4 250 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 ZNF438Q7Z4V0 828 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 B3GNT8Q7Z7M8 397 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 KIAA1328Q86T90 577 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 CCNJLQ8IV13 435 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 ARL14Q8N4G2 192 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 Q8N9G6 341 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 SPC24Q8NBT2 197 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 GPR26Q8NDV2 337 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 SNIP1Q8TAD8 396 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 ACTL9Q8TC94 416 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 ZDHHC1Q8WTX9 485 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 PATE1Q8WXA2 126 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 OXNAD1Q96HP4 312 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 MRGPRX2Q96LB1 330 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 OR2M4Q96R27 311 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 FCRL5Q96RD9 977 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 GFM1Q96RP9 751 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 DESI2Q9BSY9 194 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 GPR63Q9BZJ6 419 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 ASCL3Q9NQ33 180 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 VPS18Q9P253 973 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 KLHL8Q9P2G9 620 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 LRIT1Q9P2V4 623 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 NFKBIL1Q9UBC1 381 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 TRIM10Q9UDY6 481 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 TRHDEQ9UKU6 1024 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 SATB2Q9UPW6 733 aa8.71□□□□□ -1.02
SNRPA1-206ENST00000558059 SMG1Q96Q15 3661 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-206ENST00000558059 D6RAR5 112 aa8.7□□□□□ -1.02
SNRPA1-206ENST00000558059 F5H423 210 aaPredicted RBP8.7□□□□□ -1.02
SNRPA1-206ENST00000558059 H7C0C1 242 aa8.7□□□□□ -1.02
SNRPA1-206ENST00000558059 B4GAT1O43505 415 aa8.7□□□□□ -1.02
SNRPA1-206ENST00000558059 ASMTLO95671 621 aa8.7□□□□□ -1.02
SNRPA1-206ENST00000558059 ECEL1O95672 775 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms