RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 UGT1A5P35504 534 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 ADCY8P40145 1251 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 GNPDA1P46926 289 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 HK3P52790 923 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 CRADDP78560 199 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 PTK6Q13882 451 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 ZDHHC20Q5W0Z9 365 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 KANSL1Q7Z3B3 1105 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 PIP4P1Q86T03 277 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 JAMLQ86YT9 394 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 SLC25A45Q8N413 288 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 EID2Q8N6I1 236 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 SPATA4Q8NEY3 305 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 RHBDD1Q8TEB9 315 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 RUNDC3BQ96NL0 473 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 TRIM51Q9BSJ1 452 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 RTKNQ9BST9 563 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 LRRC61Q9BV99 259 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 CARS2Q9HA77 564 aaKnown RBP14.23□□□□□ -0.13
USP3-205ENST00000557884 UGT1A7Q9HAW7 530 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 UGT1A10Q9HAW8 530 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 UGT1A8Q9HAW9 530 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 DLL3Q9NYJ7 618 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 CDC23Q9UJX2 597 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 TMPRSS11EQ9UL52 423 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 SUFUQ9UMX1 484 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 LRRK1Q38SD2 2015 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
USP3-205ENST00000557884 GAPDHSO14556 408 aaPredicted RBP14.22□□□□□ -0.13
USP3-205ENST00000557884 TNFRSF10CO14798 259 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 FLRT2O43155 660 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 AQP9O43315 295 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 PPFIA2O75334 1257 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 MTX2O75431 263 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 SLC25A14O95258 325 aaPredicted RBP14.22□□□□□ -0.13
USP3-205ENST00000557884 PRAMEF1O95521 474 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 FUCA1P04066 466 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 CTSEP14091 401 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 MGAT1P26572 445 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 CA5AP35218 305 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 GRK6P43250 576 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 MAGEA6P43360 314 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 ID4P47928 161 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 BLKP51451 505 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 CDK16Q00536 496 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 PDE1BQ01064 536 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 INAVAQ3KP66 663 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 PDPK2PQ6A1A2 396 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 ZNF534Q76KX8 674 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 PHYKPLQ8IUZ5 450 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 GDAP1Q8TB36 358 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 BTN2A2Q8WVV5 523 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 SLCO2A1Q92959 643 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 GLYATL1Q969I3 302 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 TMEM168Q9H0V1 697 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 OR2AG1Q9H205 316 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 FAM96AQ9H5X1 160 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 SPASTQ9UBP0 616 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 PRKAB1Q9Y478 270 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 TCAF1Q9Y4C2 921 aa14.22□□□□□ -0.13
USP3-205ENST00000557884 DCHS1Q96JQ0 3298 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 HEATR9A2RTY3 570 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 MROH6A6NGR9 719 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 KIF2AO00139 706 aaPredicted RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 TRIM38O00635 465 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 GIPC1O14908 333 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 AVILO75366 819 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 MC4RP32245 332 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 NOVA1P51513 510 aaKnown RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 ARSDP51689 593 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 SARNPP82979 210 aaKnown RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 XIAPP98170 497 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 PUM1Q14671 1186 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP3-205ENST00000557884 DEFB133Q30KQ1 61 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 KHDC1Q4VXA5 237 aaKnown RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 LRRC8BQ6P9F7 803 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 DBX2Q6ZNG2 339 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 SYDE1Q6ZW31 735 aaPredicted RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 PPHLN1Q8NEY8 458 aaKnown RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 ZNF398Q8TD17 642 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 STYXQ8WUJ0 223 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 TRIM31Q9BZY9 425 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 CLPBQ9H078 707 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 SLC32A1Q9H598 525 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 ASB8Q9H765 288 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 NLE1Q9NVX2 485 aaPredicted RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 SYBUQ9NX95 663 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 BFARQ9NZS9 450 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 SLC2A6Q9UGQ3 507 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 PCOLCE2Q9UKZ9 415 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 GPSM3Q9Y4H4 160 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 PCYT1BQ9Y5K3 369 aaPredicted RBP14.21□□□□□ -0.13
USP3-205ENST00000557884 DGKBQ9Y6T7 804 aa14.21□□□□□ -0.13
USP3-205ENST00000557884 DNALI1O14645 258 aaPredicted RBP14.2□□□□□ -0.14
USP3-205ENST00000557884 SRP72O76094 671 aaKnown RBP14.2□□□□□ -0.14
USP3-205ENST00000557884 IVLP07476 585 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 PRSS56P0CW18 603 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 ADRA1DP25100 572 aa14.2□□□□□ -0.14
USP3-205ENST00000557884 HADHAP40939 763 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms