RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 LYSMD1Q96S90 227 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 NUP85Q9BW27 656 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 RBM22Q9NW64 420 aaKnown RBP eCLIP15.82■□□□□ 0.126e-8■■□□□ 13.5
SCFD1-224ENST00000557713 ZNHIT2Q9UHR6 403 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 DNPEPQ9ULA0 475 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 PRKAB1Q9Y478 270 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 BZW2Q9Y6E2 419 aaKnown RBP15.82■□□□□ 0.12
SCFD1-224ENST00000557713 OAS3Q9Y6K5 1087 aaKnown RBP15.82■□□□□ 0.12
SCFD1-224ENST00000557713 A6NCN8 305 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 DUX1O43812 170 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 ATP1A1P05023 1023 aaKnown RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 RPL26P61254 145 aaKnown RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 MC2RQ01718 297 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 NIPAL4Q0D2K0 466 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 DPYSL3Q14195 570 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 IFI16Q16666 785 aaKnown RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 TIGD7Q6NT04 549 aaPredicted RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 IYDQ6PHW0 289 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 CHST15Q7LFX5 561 aaPredicted RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 FAM129CQ86XR2 697 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 SYN2Q92777 582 aaPredicted RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 RTP4Q96DX8 246 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 TEFMQ96QE5 360 aaKnown RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 SARS2Q9NP81 518 aaKnown RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 FBXO8Q9NRD0 319 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 TBC1D29Q9UFV1 150 aa15.81■□□□□ 0.12
SCFD1-224ENST00000557713 RPL26L1Q9UNX3 145 aaKnown RBP15.81■□□□□ 0.12
SCFD1-224ENST00000557713 A8MU76 341 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 FADS2P1A8MWK0 482 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 MYO1FO00160 1098 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 CAPN5O15484 640 aaPredicted RBP15.8■□□□□ 0.12
SCFD1-224ENST00000557713 SPINT3P49223 89 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 HHEXQ03014 270 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 IQCB1Q15051 598 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 HADHQ16836 314 aaKnown RBP15.8■□□□□ 0.12
SCFD1-224ENST00000557713 TDRD12Q587J7 1177 aaKnown RBP15.8■□□□□ 0.12
SCFD1-224ENST00000557713 ANKRD20A8PQ5CZ79 823 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 HENMT1Q5T8I9 393 aaKnown RBP15.8■□□□□ 0.12
SCFD1-224ENST00000557713 SLC45A3Q96JT2 553 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 FAM83DQ9H4H8 585 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 RMI1Q9H9A7 625 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 PCDH9Q9HC56 1237 aa15.8■□□□□ 0.12
SCFD1-224ENST00000557713 TLN1Q9Y490 2541 aaKnown RBP15.8■□□□□ 0.12
SCFD1-224ENST00000557713 HECTD1Q9ULT8 2610 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 A0A087X0T9 212 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 A0A1W2PQJ5 194 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 ZNF891A8MT65 544 aaPredicted RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 NKX2-8O15522 239 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 SERPING1P05155 500 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 HLA-DQB2P05538 268 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 FAM228BP0C875 321 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 MAP4P27816 1152 aaKnown RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 PBX1P40424 430 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 EPHA4P54764 986 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 POLE2P56282 527 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 SLC10A2Q12908 348 aaPredicted RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 KCNAB2Q13303 367 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 NFATC2Q13469 925 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 QPCTQ16769 361 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 SNAP47Q5SQN1 464 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 LYSMD3Q7Z3D4 306 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 TIPARPQ7Z3E1 657 aaKnown RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 CPNE8Q86YQ8 564 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 NLGN4XQ8N0W4 816 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 LPCAT1Q8NF37 534 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 NLGN4YQ8NFZ3 816 aaPredicted RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 ZNF564Q8TBZ8 553 aaPredicted RBP15.79■□□□□ 0.12
SCFD1-224ENST00000557713 LRRN4Q8WUT4 740 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 NCSTNQ92542 709 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 SH3KBP1Q96B97 665 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 CTRCQ99895 268 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 ZPBPQ9BS86 351 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 TUBD1Q9UJT1 453 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 KCNK6Q9Y257 313 aa15.79■□□□□ 0.12
SCFD1-224ENST00000557713 C1orf232A0A0U1RR37 186 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 LOC101059948A0A1B0GTJ6 334 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 RGSL1A5PLK6 1076 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 ANKRD66B4E2M5 251 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 SERPINC1P01008 464 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 MMP2P08253 660 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 F3P13726 295 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 CA4P22748 312 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 CCR10P46092 362 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 TLE1Q04724 770 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 PDK2Q15119 407 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 ALKBH5Q6P6C2 394 aaKnown RBP15.78■□□□□ 0.12
SCFD1-224ENST00000557713 CEACAM20Q6UY09 585 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 SLC9B2Q86UD5 537 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 PTRH1Q86Y79 214 aaKnown RBP15.78■□□□□ 0.12
SCFD1-224ENST00000557713 PQLC3Q8N755 202 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 KCTD6Q8NC69 237 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 FAF2Q96CS3 445 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 CATSPER2Q96P56 530 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 ZNF670Q9BS34 389 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 HERPUD2Q9BSE4 406 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 MLPHQ9BV36 600 aaPredicted RBP15.78■□□□□ 0.12
SCFD1-224ENST00000557713 ZMYND15Q9H091 742 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 STN1Q9H668 368 aaKnown RBP15.78■□□□□ 0.12
SCFD1-224ENST00000557713 APMAPQ9HDC9 416 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms