RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PCDHGA1Q9Y5H4 931 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 PLXNA2O75051 1894 aa8.29□□□□□ -1.08
PSEN1-223ENST00000557511 SHROOM3Q8TF72 1996 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 MED19A0JLT2 244 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 PRSS38A1L453 326 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 ERI2A8K979 691 aaKnown RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 LMO7DNF2Z398 122 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 K7ESM1 405 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 INPP4BO15327 924 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 CBFA2T3O75081 653 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 GCATO75600 419 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 SPAM1P38567 509 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 PI4KAP42356 2102 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 GNPDA1P46926 289 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 DCDC1P59894 354 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 E2F1Q01094 437 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 C1orf61Q13536 156 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 SNX1Q13596 522 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 LAMB3Q13751 1172 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 GTF2H3Q13889 308 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 NR0B2Q15466 257 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 CCNG2Q16589 344 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 ALG11Q2TAA5 492 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 DEFB133Q30KQ1 61 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 SIRPB2Q5JXA9 342 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 ALS2CLQ60I27 953 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 PPP1R21Q6ZMI0 780 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 TMC3Q7Z5M5 1100 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 GALNT13Q8IUC8 556 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 PHYKPLQ8IUZ5 450 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 RBFAQ8N0V3 343 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 CBARPQ8N350 705 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 SLC25A45Q8N413 288 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 DNAAF3Q8N9W5 541 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 OR6C4Q8NGE1 309 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 BAHD1Q8TBE0 780 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 ATG4AQ8WYN0 398 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 NAT6Q93015 286 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 SCAMP4Q969E2 229 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 TADA1Q96BN2 335 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 PDLIM2Q96JY6 352 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 HERPUD2Q9BSE4 406 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-223ENST00000557511 RMI1Q9H9A7 625 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 UCKL1Q9NWZ5 548 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 PAK5Q9P286 719 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 GULP1Q9UBP9 304 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 GPR34Q9UPC5 381 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
PSEN1-223ENST00000557511 TRPM6Q9BX84 2022 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 ADAMTS9Q9P2N4 1935 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 CPED1A4D0V7 1026 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 TMEM202A6NGA9 273 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 AP3B1O00203 1094 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 PGRMC1O00264 195 aaKnown RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 SLC25A14O95258 325 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 AGTP01019 485 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 IVLP07476 585 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 GM2AP17900 193 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 LPOP22079 712 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 CXCR5P32302 372 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 SOX11P35716 441 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 HMGCLP35914 325 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 HADHAP40939 763 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 PPM1FP49593 454 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 GNG11P61952 73 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 ITGA9Q13797 1035 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 LRP8Q14114 963 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 IHHQ14623 411 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 PTPRRQ15256 657 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 TPRG1LQ5T0D9 272 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 KDM7AQ6ZMT4 941 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 MARK2Q7KZI7 788 aaKnown RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 SLC35F6Q8N357 371 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 PNPLA1Q8N8W4 532 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 FAM46DQ8NEK8 389 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 BRSK1Q8TDC3 778 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 ADAMTS14Q8WXS8 1223 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 OR1E3Q8WZA6 343 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 PDXPQ96GD0 296 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 APOLD1Q96LR9 279 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 PLEKHG4BQ96PX9 1271 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 SMIM14Q96QK8 99 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 OR2M4Q96R27 311 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 APOL2Q9BQE5 337 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 LRRC61Q9BV99 259 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 LGR4Q9BXB1 951 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 TLR10Q9BXR5 811 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 DPEP2Q9H4A9 486 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 STN1Q9H668 368 aaKnown RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 FGF22Q9HCT0 170 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 BPIFA1Q9NP55 256 aa8.27□□□□□ -1.09
PSEN1-223ENST00000557511 TRNAU1APQ9NX07 287 aaKnown RBP8.27□□□□□ -1.09
PSEN1-223ENST00000557511 VPS18Q9P253 973 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms