RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PSAPL1Q6NUJ1 521 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 RAB44Q7Z6P3 723 aaPredicted RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 GALNT7Q86SF2 657 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 FAM47BQ8NA70 645 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 PCYOX1LQ8NBM8 494 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 FEM1CQ96JP0 617 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 PDFQ9HBH1 243 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 SARS2Q9NP81 518 aaKnown RBP17.63■□□□□ 0.41
XRCC3-218ENST00000557439 OLAHQ9NV23 265 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 NDUFAF1Q9Y375 327 aa17.63■□□□□ 0.41
XRCC3-218ENST00000557439 IQCF5A8MTL0 148 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 BTN3A1O00481 513 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 HLA-DPA1P20036 260 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 SLC5A2P31639 672 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 PRKCZQ05513 592 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 AAK1Q2M2I8 961 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 C18orf21Q32NC0 220 aaPredicted RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 PAGE3Q5JUK9 113 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 MFSD14CQ5VZR4 134 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 EFHBQ8N7U6 833 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 SIDT2Q8NBJ9 832 aaKnown RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 SOX17Q9H6I2 414 aaPredicted RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 ZFP37Q9Y6Q3 630 aaPredicted RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 ASPDHA6ND91 283 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 PTPRNQ16849 979 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 PARP15Q460N3 678 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 GLT6D1Q7Z4J2 308 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 SYVN1Q86TM6 617 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 TRIML2Q8N7C3 387 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 CCDC97Q96F63 343 aaPredicted RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 HIC2Q96JB3 615 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 FAM193BQ96PV7 902 aaPredicted RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 TRIB3Q96RU7 358 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 UPF3AQ9H1J1 476 aaKnown RBP17.62■□□□□ 0.41
XRCC3-218ENST00000557439 FNIP2Q9P278 1114 aa17.62■□□□□ 0.41
XRCC3-218ENST00000557439 LBPP18428 481 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 SLC26A3P40879 764 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 UFM1P61960 85 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 TXNL4AP83876 142 aaKnown RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 PLIN5Q00G26 463 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 B3GNT6Q6ZMB0 384 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 LPCAT1Q8NF37 534 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 OR2T11Q8NH01 316 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 TOP1MTQ969P6 601 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 LRRC58Q96CX6 371 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 FUBP3Q96I24 572 aaKnown RBP eCLIP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 MRPL40Q9NQ50 206 aaKnown RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 TLR8Q9NR97 1041 aaKnown RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 CNOT11Q9UKZ1 510 aaKnown RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 SQORQ9Y6N5 450 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 DHRS12A0PJE2 317 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 MANSC4A6NHS7 340 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 DLGAP1O14490 977 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 GJB5O95377 273 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 FGF4P08620 206 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 CKBP12277 381 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 SUOXP51687 545 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 LINGO4Q6UY18 593 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 ERMP1Q7Z2K6 904 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 TMEM173Q86WV6 379 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 CMTR2Q8IYT2 770 aaKnown RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 FUBP1Q96AE4 644 aaKnown RBP17.61■□□□□ 0.41
XRCC3-218ENST00000557439 OSBPL11Q9BXB4 747 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 MUC3BQ9H195 1237 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 PTTG2Q9NZH5 202 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 FKBPLQ9UIM3 349 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 CEPT1Q9Y6K0 416 aa17.61■□□□□ 0.41
XRCC3-218ENST00000557439 MTMR11A4FU01 709 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ARPC2O15144 300 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 NDST3O95803 873 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 HK3P52790 923 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 LCP2Q13094 533 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 NHSL2Q5HYW2 709 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 HACD2Q6Y1H2 254 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 FIBCD1Q8N539 461 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 GPR150Q8NGU9 434 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 KIAA1191Q96A73 305 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ROPN1LQ96C74 230 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 UHRF1Q96T88 793 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 TFB2MQ9H5Q4 396 aaKnown RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ZFYVE28Q9HCC9 887 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 SLC52A3Q9NQ40 469 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 SDR39U1Q9NRG7 319 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 SMOXQ9NWM0 555 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 NDUFA13Q9P0J0 144 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 MKI67P46013 3256 aaKnown RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 F5H5T6 163 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 INPP4BO15327 924 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 KERAO60938 352 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 NDUFS3O75489 264 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 H6PDO95479 791 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 PRLP01236 227 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 IGLV3-27P01718 113 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ASLP04424 464 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 HSPA8P11142 646 aaKnown RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ARL1P40616 181 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ATP4BP51164 291 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ZNF140P52738 457 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 NR1H2P55055 460 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms