RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CDH6P55285 790 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 MC2RQ01718 297 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 SQSTM1Q13501 440 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 PLA2G4EQ3MJ16 856 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 ATP13A4Q4VNC1 1196 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 KDELC2Q7Z4H8 507 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 PSTKQ8IV42 348 aaKnown RBP13.96□□□□□ -0.17
SLIRP-210ENST00000557431 LPCAT1Q8NF37 534 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 STARD8Q92502 1023 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 ABHD17AQ96GS6 310 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 ASPSCR1Q9BZE9 553 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 KCTD5Q9NXV2 234 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 DTLQ9NZJ0 730 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 CNOT6Q9ULM6 557 aaKnown RBP13.96□□□□□ -0.17
SLIRP-210ENST00000557431 PLAAQ9Y263 795 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 SCINQ9Y6U3 715 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 CACNA1DQ01668 2161 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 PRLP01236 227 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 HLA-DQB2P05538 268 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 NFKBIAP25963 317 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 PCK1P35558 622 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 RAB15P59190 212 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 FOXK1P85037 733 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 SLC25A11Q02978 314 aaKnown RBP13.95□□□□□ -0.18
SLIRP-210ENST00000557431 NIPAL4Q0D2K0 466 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 KLHL30Q0D2K2 578 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 UBAP2LQ14157 1087 aaKnown RBP13.95□□□□□ -0.18
SLIRP-210ENST00000557431 KRT81Q14533 505 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 HIST2H2BCQ6DN03 193 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 CEACAM20Q6UY09 585 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 ELMO2Q96JJ3 720 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 TDRD1Q9BXT4 1180 aaKnown RBP13.95□□□□□ -0.18
SLIRP-210ENST00000557431 BRD8Q9H0E9 1235 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
SLIRP-210ENST00000557431 PRDM8Q9NQV8 689 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 SCHIP1Q9P0W5 487 aaPredicted RBP13.95□□□□□ -0.18
SLIRP-210ENST00000557431 PDP2Q9P2J9 529 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 TP53TG5Q9Y2B4 290 aa13.95□□□□□ -0.18
SLIRP-210ENST00000557431 A6NCN8 305 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 MTSS1O43312 755 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 DLGAP3O95886 979 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 SLC4A1P02730 911 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 FURINP09958 794 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 GZMAP12544 262 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 TYRP1P17643 537 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 IL4RP24394 825 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 SERPINB6P35237 376 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 CASRP41180 1078 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 SSR1P43307 286 aaKnown RBP13.94□□□□□ -0.18
SLIRP-210ENST00000557431 SEPHS1P49903 392 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 ZNF135P52742 658 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-210ENST00000557431 SH3BP2P78314 561 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 FOXM1Q08050 763 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 IYDQ6PHW0 289 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 ZNF765Q7L2R6 523 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 TMEM135Q86UB9 458 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 TEX26Q8N6G2 289 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 EXD1Q8NHP7 514 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 KIAA1143Q96AT1 154 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-210ENST00000557431 DPYSL5Q9BPU6 564 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 POLR1EQ9GZS1 481 aaKnown RBP13.94□□□□□ -0.18
SLIRP-210ENST00000557431 THAP2Q9H0W7 228 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 OSGEPL1Q9H4B0 414 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 SARS2Q9NP81 518 aaKnown RBP13.94□□□□□ -0.18
SLIRP-210ENST00000557431 RBM22Q9NW64 420 aaKnown RBP eCLIP13.94□□□□□ -0.187e-6■■■□□ 17.4
SLIRP-210ENST00000557431 OGFRQ9NZT2 677 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 ANAPC7Q9UJX3 599 aa13.94□□□□□ -0.18
SLIRP-210ENST00000557431 TMEM184BQ9Y519 407 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-210ENST00000557431 FLNCQ14315 2725 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 ESPL1Q14674 2120 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 C1orf232A0A0U1RR37 186 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 PRR19A6NJB7 356 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 PIRTP0C851 137 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 ZNF30P17039 623 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 TCN2P20062 427 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 MAP4P27816 1152 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 GARSP41250 739 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 PRKCIP41743 596 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 PEX6Q13608 980 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 GALNT3Q14435 633 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 BOLA3Q53S33 107 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 TDRD12Q587J7 1177 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 RALGPS1Q5JS13 557 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 HENMT1Q5T8I9 393 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 CRTC3Q6UUV7 619 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 ARRDC2Q8TBH0 407 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 NAP1L5Q96NT1 182 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 CATSPER2Q96P56 530 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 TEFMQ96QE5 360 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 PCDH9Q9HC56 1237 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 SIDT1Q9NXL6 827 aaKnown RBP13.93□□□□□ -0.18
SLIRP-210ENST00000557431 AIPL1Q9NZN9 384 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 ATXN10Q9UBB4 475 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 ANAPC2Q9UJX6 822 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 MYO6Q9UM54 1294 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms