RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 LCN10Q6JVE6 187 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 FAM72DQ6L9T8 149 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 DUS1LQ6P1R4 473 aaKnown RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 IGFL3Q6UXB1 125 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 FAM72BQ86X60 149 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 LMO3Q8TAP4 145 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF396Q96N95 335 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 TRAPPC9Q96Q05 1148 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 MLPHQ9BV36 600 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 NOL6Q9H6R4 1146 aaKnown RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 CPNE7Q9UBL6 633 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 B4GALT6Q9UBX8 382 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 KCNK6Q9Y257 313 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 PCDHGB6Q9Y5F9 930 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-220ENST00000557037 CSAG2Q9Y5P2 127 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
PSEN1-220ENST00000557037 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 FOLR1P15328 257 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 SERPINA4P29622 427 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 USP8P40818 1118 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 RGRP47804 291 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 KCNK10P57789 538 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 GPS2Q13227 327 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 CNGA3Q16281 694 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-220ENST00000557037 RAB6CQ53S08 254 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 MANEALQ5VSG8 457 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-220ENST00000557037 HSD11B1LQ7Z5J1 315 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 SRLQ86TD4 932 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF808Q8N4W9 903 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-220ENST00000557037 FAR1Q8WVX9 515 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 CCDC120Q96HB5 630 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 RAB6CQ9H0N0 254 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 ATP13A3Q9H7F0 1226 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
PSEN1-220ENST00000557037 WASH6PQ9NQA3 447 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 FGF21Q9NSA1 209 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 SUCOQ9UBS9 1254 aaKnown RBP12.35□□□□□ -0.43
PSEN1-220ENST00000557037 ZNHIT2Q9UHR6 403 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 TCFL5Q9UL49 500 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 ATRQ13535 2644 aa12.35□□□□□ -0.43
PSEN1-220ENST00000557037 TOX3O15405 576 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 UBXN7O94888 489 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 NELFEP18615 380 aaKnown RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 GPR1P46091 355 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 LRP8Q14114 963 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 IZUMO3Q5VZ72 239 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 TRNP1Q6NT89 227 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 IRGCQ6NXR0 463 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 CERS6Q6ZMG9 384 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 Q6ZVL8 140 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 CHST15Q7LFX5 561 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 PRSS42Q7Z5A4 293 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 CHTF18Q8WVB6 975 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 KLHL6Q8WZ60 621 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 DTD2Q96FN9 168 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF552Q9H707 407 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 MCCC2Q9HCC0 563 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 UBE2TQ9NPD8 197 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 UBA2Q9UBT2 640 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 NEU3Q9UQ49 428 aa12.34□□□□□ -0.43
PSEN1-220ENST00000557037 ZNF469Q96JG9 3925 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-220ENST00000557037 TRGV8A0A0C4DH27 118 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 MASP2O00187 686 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 GRID2O43424 1007 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 LRIG2O94898 1065 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 ASMTLO95671 621 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 EBLN1P0CF75 366 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 OTX2P32243 289 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 FLT3P36888 993 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 MYBPC3Q14896 1274 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 HIF1AQ16665 826 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 RFLNAQ6ZTI6 216 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 GALNT16Q8N428 558 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 SIDT2Q8NBJ9 832 aaKnown RBP12.33□□□□□ -0.44
PSEN1-220ENST00000557037 SLC38A9Q8NBW4 561 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 SHC3Q92529 594 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 TM9SF4Q92544 642 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 RSC1A1Q92681 617 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 ECHDC3Q96DC8 303 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 TBC1D31Q96DN5 1066 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 CFAP57Q96MR6 1250 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 HERPUD2Q9BSE4 406 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 PLCB1Q9NQ66 1216 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 CD84Q9UIB8 345 aa12.33□□□□□ -0.44
PSEN1-220ENST00000557037 CCL21O00585 134 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 CPNE3O75131 537 aaKnown RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 JRKO75564 520 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 SCRG1O75711 98 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 HEXIM1O94992 359 aaKnown RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 MYL1P05976 194 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms