RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TNFRSF21O75509 655 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PTMAP06454 111 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PNLIPP16233 465 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 LHCGRP22888 699 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 EIF2S3P41091 472 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 GNPDA1P46926 289 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PPM1FP49593 454 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PCBP4P57723 403 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 IFI35P80217 286 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PTSQ03393 145 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SLC10A2Q12908 348 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 EIF3IQ13347 325 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TBC1D25Q3MII6 688 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TFDP3Q5H9I0 405 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SLC9A4Q6AI14 798 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 FOXR1Q6PIV2 292 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ADAMTSL4Q6UY14 1074 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ZNF765Q7L2R6 523 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 DAAM2Q86T65 1068 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TSPAN33Q86UF1 283 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TMTC1Q8IUR5 882 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 RCOR2Q8IZ40 523 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 WDR36Q8NI36 951 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TFB1MQ8WVM0 346 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 RBM41Q96IZ5 413 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 HIC2Q96JB3 615 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TMEM74Q96NL1 305 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SLC25A51Q9H1U9 297 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 FAM83DQ9H4H8 585 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 LRIT1Q9P2V4 623 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ZNHIT2Q9UHR6 403 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CD84Q9UIB8 345 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 APPL1Q9UKG1 709 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PNMA8BQ9ULN7 279 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PCDHB1Q9Y5F3 818 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PCDHA13Q9Y5I0 950 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ALG6Q9Y672 507 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 U3KQA8 63 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 COL5A1P20908 1838 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 A0A0A6YYK5 440 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 GOLGA6L6A8MZA4 724 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CST8O60676 142 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CLDN7O95471 211 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 RPLP0P05388 317 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 HLA-DQB2P05538 268 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CEACAM5P06731 702 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CELA2BP08218 269 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CTNNA2P26232 953 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ALDH4A1P30038 563 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 HADHBP55084 474 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 UCNP55089 124 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 LRP8Q14114 963 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 COL28A1Q2UY09 1125 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 C14orf28Q4W4Y0 310 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TEX44Q53QW1 395 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 C3orf38Q5JPI3 329 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 KAZNQ674X7 775 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 OGFOD3Q6PK18 319 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 DOK6Q6PKX4 331 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SLC30A9Q6PML9 568 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 XKR5Q6UX68 686 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 KDELC2Q7Z4H8 507 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TECPR1Q7Z6L1 1165 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PIM3Q86V86 326 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CPNE8Q86YQ8 564 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 GALNT13Q8IUC8 556 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CCNJLQ8IV13 435 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 Q8N9G6 341 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TC2NQ8N9U0 490 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 KYQ8NBH2 561 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 GPR156Q8NFN8 814 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SNIP1Q8TAD8 396 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ARRDC2Q8TBH0 407 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SCAMP4Q969E2 229 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 TMEM159Q96B96 161 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ATXN7L3BQ96GX2 97 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 MRFAP1L1Q96HT8 127 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 NSMCE3Q96MG7 304 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SLC46A1Q96NT5 459 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PANX2Q96RD6 677 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 LYSMD1Q96S90 227 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CMKLR1Q99788 373 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 RIOK2Q9BVS4 552 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ABCG8Q9H221 673 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 STN1Q9H668 368 aaKnown RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 CAAP1Q9H8G2 361 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 ZFYVE1Q9HBF4 777 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 FOXD3Q9UJU5 478 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SUFUQ9UMX1 484 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 SATB2Q9UPW6 733 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PCDHGA8Q9Y5G5 932 aa7.29□□□□□ -1.24
SCFD1-222ENST00000556768 EPN1Q9Y6I3 576 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-222ENST00000556768 PLXNA2O75051 1894 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 KALRNO60229 2985 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 CCDC187A0A096LP49 1063 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 IVLP07476 585 aa7.28□□□□□ -1.24
SCFD1-222ENST00000556768 JMJD7P0C870 316 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms