RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ADIPOQQ15848 244 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 DCST1Q5T197 706 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 LRIF1Q5T3J3 769 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 CCDC30Q5VVM6 783 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-221ENST00000556534 ATG9AQ7Z3C6 839 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 NR2C2APQ86WQ0 139 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 RNF168Q8IYW5 571 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-221ENST00000556534 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 EGLN2Q96KS0 407 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 TTC14Q96N46 770 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 SEPT5Q99719 369 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-221ENST00000556534 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 PIGMQ9H3S5 423 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 RRP7BPQ9NSQ0 103 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 COPG2Q9UBF2 871 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 PADI1Q9ULC6 663 aa4.48□□□□□ -1.69
SCFD1-221ENST00000556534 CORO1CQ9ULV4 474 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-221ENST00000556534 TAF1P21675 1872 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 FAM90A26D6RGX4 464 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 LDB3O75112 727 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 F7P08709 466 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 ACADMP11310 421 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 CDH1P12830 882 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 ARL3P36405 182 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 FUT6P51993 359 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 CLDN20P56880 219 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 MAD2L1Q13257 205 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 EIF4A2Q14240 407 aaKnown RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 ASTE1Q2TB18 679 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 ZNF805Q5CZA5 627 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 LCN10Q6JVE6 187 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 PAPD4Q6PIY7 484 aaKnown RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 SDCCAG8Q86SQ7 713 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 TSPAN33Q86UF1 283 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 RNF113BQ8IZP6 322 aaKnown RBP4.47□□□□□ -1.69
SCFD1-221ENST00000556534 PDILTQ8N807 584 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 KBTBD3Q8NAB2 608 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 POC1AQ8NBT0 407 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 OR1J2Q8NGS2 313 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 ZHX3Q9H4I2 956 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 MAGIXQ9H6Y5 334 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 DONSONQ9NYP3 566 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 OR14J1Q9UGF5 321 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 FBXW11Q9UKB1 542 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 OR2W1Q9Y3N9 320 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 PCDHAC2Q9Y5I4 1007 aa4.47□□□□□ -1.69
SCFD1-221ENST00000556534 PTPRCP08575 1304 aa4.46□□□□□ -1.69
SCFD1-221ENST00000556534 SCAMP1O15126 338 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 DAB1O75553 588 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 KRT36O76013 467 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 CAMTA2O94983 1202 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 KCNK5O95279 499 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 ICAM1P05362 532 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 ACADLP28330 430 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 ZNF132P52740 706 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 GEMIN4P57678 1058 aaKnown RBP4.46□□□□□ -1.7
SCFD1-221ENST00000556534 PDE1BQ01064 536 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-221ENST00000556534 RUNX1T1Q06455 604 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 TROAPQ12815 778 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 SIM2Q14190 667 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-221ENST00000556534 PNLIPRP3Q17RR3 467 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 GKAP1Q5VSY0 366 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-221ENST00000556534 C18orf63Q68DL7 685 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 JADE1Q6IE81 842 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 TRNP1Q6NT89 227 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 SARM1Q6SZW1 724 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 FOXL2NBQ6ZUU3 175 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 C9orf139Q6ZV77 190 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 IKBIPQ70UQ0 350 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 WDTC1Q8N5D0 677 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 KCNH5Q8NCM2 988 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 THAP6Q8TBB0 222 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 SLC38A5Q8WUX1 472 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 USP6NLQ92738 828 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 ZKSCAN4Q969J2 545 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-221ENST00000556534 PIGTQ969N2 578 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 ELMOD3Q96FG2 381 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 QRFPRQ96P65 431 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 SETD4Q9NVD3 440 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 HCFC1R1Q9NWW0 138 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 MTMR10Q9NXD2 777 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 UBA2Q9UBT2 640 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-221ENST00000556534 STK39Q9UEW8 545 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 FBXL2Q9UKC9 423 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 DLGAP4Q9Y2H0 992 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 KLHL20Q9Y2M5 609 aa4.46□□□□□ -1.7
SCFD1-221ENST00000556534 A0A1W2PP11 408 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 KANSL1LA0AUZ9 987 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 FRMD3A2A2Y4 597 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 MAP2K7O14733 419 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 HS3ST1O14792 307 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 PTP4A3O75365 173 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 ZNF432O94892 652 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 OR2C1O95371 312 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 RARGP13631 454 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 AMD1P17707 334 aa4.45□□□□□ -1.7
SCFD1-221ENST00000556534 UGT1A1P22309 533 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms