RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ATP8B1O43520 1251 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 EXTL3O43909 919 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 SYNCRIPO60506 623 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 SLC43A1O75387 559 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ERLIN1O75477 346 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CSPG5O95196 566 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CD1AP06126 327 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 H2AFZP0C0S5 128 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 TXNP10599 105 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 TFEBP19484 476 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 IL4RP24394 825 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 MAPK3P27361 379 aaPredicted RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 TMOD1P28289 359 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 EEF1DP29692 281 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 TLX1P31314 330 aaPredicted RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 ARL2P36404 184 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 PSMB10P40306 273 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 PAFAH1B1P43034 410 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CLK3P49761 638 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 SP2Q02086 613 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ITIH3Q06033 890 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 NCBP1Q09161 790 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 MRPL28Q13084 256 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 MPP3Q13368 585 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 DRAP1Q14919 205 aaPredicted RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 NAB2Q15742 525 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 GPR68Q15743 365 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 SNRNP35Q16560 246 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 KYAT1Q16773 422 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 GEN1Q17RS7 908 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 KHDC1Q4VXA5 237 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 EPC2Q52LR7 807 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 KHDC1LQ5JSQ8 128 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ZNF484Q5JVG2 852 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 TAF2Q6P1X5 1199 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 C16orf87Q6PH81 154 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 H2AFVQ71UI9 128 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 TRAPPC11Q7Z392 1133 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 IRF2BP2Q7Z5L9 587 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ZER1Q7Z7L7 766 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 GALNT4Q8N4A0 578 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 USP38Q8NB14 1042 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 FBXL13Q8NEE6 735 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 SLC22A17Q8WUG5 538 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 DEPDC1BQ8WUY9 529 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 PSPC1Q8WXF1 523 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 KRT35Q92764 455 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CAVIN3Q969G5 261 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 SNX27Q96L92 541 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 Q96MF0 132 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 SPATA33Q96N06 139 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 DACH2Q96NX9 599 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ATP6V0BQ99437 205 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CBWD1Q9BRT8 395 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 RTKNQ9BST9 563 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CARD6Q9BX69 1037 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 MUC13Q9H3R2 512 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 LIN28AQ9H9Z2 209 aaKnown RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 POLD4Q9HCU8 107 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 SIX2Q9NPC8 291 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 XPNPEP1Q9NQW7 623 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 ERAP1Q9NZ08 941 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 JKAMPQ9P055 326 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 UBA2Q9UBT2 640 aaPredicted RBP5.24□□□□□ -1.57
SRP54-211ENST00000556445 LAMP5Q9UJQ1 280 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 DNAJC12Q9UKB3 198 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 HYOU1Q9Y4L1 999 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 CCL27Q9Y4X3 112 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 DOCK5Q9H7D0 1870 aa5.24□□□□□ -1.57
SRP54-211ENST00000556445 LRRC37A2A6NM11 1700 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 IGKV6-21A0A0C4DH24 114 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 MACROD2A1Z1Q3 448 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 ERICH4A6NGS2 130 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 BTBD19C9JJ37 291 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 F8VZ95 297 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CES2O00748 559 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TXNL1O43396 289 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TLR2O60603 784 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 SEC22BO75396 215 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 AGFG2O95081 481 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 PLEKP08567 350 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRIM49P0CI25 452 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRIM49CP0CI26 452 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 ACTN1P12814 892 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 PTPN2P17706 415 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 ADORA2AP29274 412 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 MATR3P43243 847 aaKnown RBP eCLIP5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRPC1P48995 793 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CARSP49589 748 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 GPC3P51654 580 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 YBEYP58557 167 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 YWHAEP62258 255 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 GCNT1Q02742 428 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CYP24A1Q07973 514 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 ACTN3Q08043 901 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 COX10Q12887 443 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 MAPK6Q16659 721 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 LY6KQ17RY6 165 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRIM71Q2Q1W2 868 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 PRICKLE4Q2TBC4 344 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms