RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NOTCH2Q04721 2471 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 TCHHQ07283 1943 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 POM121BA6NF01 834 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 LMO7DNF2Z398 122 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PDXKO00764 312 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 NEMP1O14524 444 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 DVL2O14641 736 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 YY2O15391 372 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 CYP7B1O75881 506 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PAK4O96013 591 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 NR3C1P04150 777 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ANXA6P08133 673 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF20P17024 532 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SLC9A1P19634 815 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 AOAHP28039 575 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 CCKBRP32239 447 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 CHRNA3P32297 505 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 GTF2H1P32780 548 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ADKP55263 362 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 POLE2P56282 527 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 DAOAP59103 153 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 RPS21P63220 83 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 CYP4F2P78329 520 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ENPEPQ07075 957 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 BST2Q10589 180 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SGCGQ13326 291 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PDE1CQ14123 709 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PTK2BQ14289 1009 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 GOLGA7BQ2TAP0 167 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ATP13A4Q4VNC1 1196 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SEL1L3Q68CR1 1132 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 OR6B2Q6IFH4 312 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 KYAT3Q6YP21 454 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 INTS8Q75QN2 995 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ERN2Q76MJ5 926 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PTAR1Q7Z6K3 402 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 VASH2Q86V25 355 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ZSCAN30Q86W11 494 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ZFAND4Q86XD8 727 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SLC35F3Q8IY50 421 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 LGI2Q8N0V4 545 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 HIPK4Q8NE63 616 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 OR6C4Q8NGE1 309 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 UBA3Q8TBC4 463 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 HTR3CQ8WXA8 447 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ASB15Q8WXK1 588 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 DHX58Q96C10 678 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 MYEOVQ96EZ4 313 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SLC39A13Q96H72 371 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 HSFY1Q96LI6 401 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 TBATAQ96M53 351 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PRICKLE1Q96MT3 831 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SERPINB11Q96P15 392 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 GBP4Q96PP9 640 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 LENG8Q96PV6 779 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 GFM1Q96RP9 751 aaKnown RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 CMKLR1Q99788 373 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SYT3Q9BQG1 590 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 FEM1AQ9BSK4 669 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SLC17A9Q9BYT1 436 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 MAGEF1Q9HAY2 307 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 EPB41L5Q9HCM4 733 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 EMC7Q9NPA0 242 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 FZD3Q9NPG1 666 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SPTLC3Q9NUV7 552 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 H2AFY2Q9P0M6 372 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PLEKHB1Q9UF11 243 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-239ENST00000556315 PISDQ9UG56 409 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SLC12A6Q9UHW9 1150 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 SLC25A13Q9UJS0 675 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 TSPAN16Q9UKR8 245 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 LOXL2Q9Y4K0 774 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ATMQ13315 3056 aa4.91□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF839A8K0R7 811 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 F5H5T6 163 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 M0QYT0 321 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 KPNA3O00505 521 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 FPGTO14772 594 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CASC3O15234 703 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SPTLC2O15270 562 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 AKAP8O43823 692 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CALUO43852 315 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 GCATO75600 419 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 FBXO21O94952 628 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 MOCS2O96007 188 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 APOEP02649 317 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 MMEP08473 750 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 VDRP11473 427 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 KRT13P13646 458 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 HGFP14210 728 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CD19P15391 556 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 PDGFRAP16234 1089 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 WT1P19544 449 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 PDCP20941 246 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 TACR2P21452 398 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CD40P25942 277 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 LSP1P33241 339 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 BLKP51451 505 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms