RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RHDQ02161 417 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 LAMB3Q13751 1172 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF235Q14590 738 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 RFTN1Q14699 578 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ANKRD20A4Q4UJ75 823 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 FAM133BQ5BKY9 247 aaKnown RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PPM1LQ5SGD2 360 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ARTNQ5T4W7 220 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 GRTP1Q5TC63 336 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF468Q5VIY5 522 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PKN3Q6P5Z2 889 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 LILRA6Q6PI73 481 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF783Q6ZMS7 281 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ATG14Q6ZNE5 492 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SPATA31D4Q6ZUB0 917 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CEP68Q76N32 757 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CHST9Q7L1S5 443 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 RTL10Q7L3V2 364 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SETD3Q86TU7 594 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TMEM135Q86UB9 458 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CFAP52Q8N1V2 620 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TEX26Q8N6G2 289 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 BANPQ8N9N5 519 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SPATA22Q8NHS9 363 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 GABPB2Q8TAK5 448 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 MZB1Q8WU39 189 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 NINJ1Q92982 152 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF837Q96EG3 531 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 IMP4Q96G21 291 aaKnown RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CERS2Q96G23 380 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 MED8Q96G25 268 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 OXNAD1Q96HP4 312 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PAIP2Q9BPZ3 127 aaKnown RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 APOL2Q9BQE5 337 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 GORASP1Q9BQQ3 440 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 RNF38Q9H0F5 515 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 RABEP2Q9H5N1 569 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PLAC1Q9HBJ0 212 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TRPC7Q9HCX4 862 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 NT5MQ9NPB1 228 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 GKN1Q9NS71 199 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 NSMCE4AQ9NXX6 385 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF212Q9UDV6 495 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 GGA2Q9UJY4 613 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 STOML2Q9UJZ1 356 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 AGO1Q9UL18 857 aaKnown RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF510Q9Y2H8 683 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CACNA1DQ01668 2161 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CRYBG3Q68DQ2 2970 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TRAV19A0A0A6YYK7 116 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 C2orf78A6NCI8 922 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PCNX2A6NKB5 2137 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 FAM170BA6NMN3 283 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TCP11X1B4DZS4 312 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GOLGA8RI6L899 631 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 J3KR12 359 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 COPEO14579 308 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TSPAN3O60637 253 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PIAS1O75925 651 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PEX11BO96011 259 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 MT-CYBP00156 380 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GLUD1P00367 558 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 C1QAP02745 245 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 C8AP07357 584 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TPH1P17752 444 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 DRD4P21917 467 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ADRA1DP25100 572 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GABRR2P28476 465 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 RPA3P35244 121 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SPRP35270 261 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ADRA1AP35348 466 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GP5P40197 560 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CLCN4P51793 760 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 HNRNPH2P55795 449 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 WNT3AP56704 352 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PDE1BQ01064 536 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SLC18A2Q05940 514 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CYP4F3Q08477 520 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SLC10A7Q0GE19 358 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 HTR4Q13639 388 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TM4SF20Q53R12 229 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CERCAMQ5T4B2 595 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PDPK2PQ6A1A2 396 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 RFWD3Q6PCD5 774 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TRMT10BQ6PF06 316 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ELMSAN1Q6PJG2 1045 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 LVRNQ6Q4G3 990 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 KDELC1Q6UW63 502 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 RANBP10Q6VN20 620 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TIFABQ6ZNK6 161 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 NLRP9Q7RTR0 991 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TMEM150AQ86TG1 271 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 LRRC34Q8IZ02 419 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CACNA2D3Q8IZS8 1091 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms