RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 RTL3Q8N8U3 475 aaKnown RBP9.05□□□□□ -0.96
PRKCH-218ENST00000555628 SLC37A2Q8TED4 501 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 CENPIQ92674 756 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-218ENST00000555628 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 TUBGCP5Q96RT8 1024 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 CRACR2AQ9BSW2 395 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 DONSONQ9NYP3 566 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 CROTQ9UKG9 612 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 HPCAL4Q9UM19 191 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 SUFUQ9UMX1 484 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 PLEKHM1Q9Y4G2 1056 aa9.05□□□□□ -0.96
PRKCH-218ENST00000555628 PCYT1BQ9Y5K3 369 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-218ENST00000555628 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
PRKCH-218ENST00000555628 RASA4BC9J798 803 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 FOXN3O00409 490 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 RASA4O43374 803 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 ELFN1P0C7U0 828 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 GNPDA1P46926 289 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 CSNK1DP48730 415 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 POLD2P49005 469 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 SNX16P57768 344 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 CDK3Q00526 305 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 SEMA5AQ13591 1074 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 GRM3Q14832 879 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 CNGA3Q16281 694 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 C15orf59Q2T9L4 293 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 CCDC14Q49A88 953 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 CPZQ66K79 652 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 RWDD4Q6NW29 188 aaKnown RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 UMODL1-AS1Q8N2C9 162 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 EMC1Q8N766 993 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 NTAN1Q96AB6 310 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 C18orf8Q96DM3 657 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 FAM81BQ96LP2 452 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 MDFIQ99750 246 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 SAP130Q9H0E3 1048 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 LRRC19Q9H756 370 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 SYNCQ9H7C4 482 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 CASS4Q9NQ75 786 aa9.04□□□□□ -0.96
PRKCH-218ENST00000555628 RCOR3Q9P2K3 495 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 PCDHGA9Q9Y5G4 932 aaKnown RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 DIDO1Q9BTC0 2240 aaKnown RBP9.04□□□□□ -0.96
PRKCH-218ENST00000555628 GTPBP10A4D1E9 387 aaKnown RBP9.03□□□□□ -0.96
PRKCH-218ENST00000555628 C2CD4BA6NLJ0 364 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 ZW10O43264 779 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 PRAMEF11O60813 436 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 CEACAM4O75871 244 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 LHCGRP22888 699 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 XPAP23025 273 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-218ENST00000555628 PON1P27169 355 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 DLSTP36957 453 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 USP8P40818 1118 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 PTPN9P43378 593 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 NDST2P52849 883 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 COPB1P53618 953 aaKnown RBP9.03□□□□□ -0.96
PRKCH-218ENST00000555628 YBEYP58557 167 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-218ENST00000555628 NOMO3P69849 1222 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 KRT85P78386 507 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 ATP11AP98196 1134 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 ERV3-1Q14264 604 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 INPP5JQ15735 1006 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-218ENST00000555628 SWI5Q1ZZU3 235 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 EIF2S3LQ2VIR3 472 aaKnown RBP9.03□□□□□ -0.96
PRKCH-218ENST00000555628 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 PARP15Q460N3 678 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 COX20Q5RI15 118 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 CHSY3Q70JA7 882 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 PYROXD2Q8N2H3 581 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 NELFBQ8WX92 580 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 DTD2Q96FN9 168 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 B4GALT6Q9UBX8 382 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
PRKCH-218ENST00000555628 FAM170AA1A519 330 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 A8MU76 341 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 GOLGA8SH3BPF8 625 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 TGFBR3LH3BV60 316 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 J3KR12 359 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 PDE2AO00408 941 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 POLR1CO15160 346 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 TEX33O43247 280 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 HTRA2O43464 458 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 CREG1O75629 220 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 HEXIM1O94992 359 aaKnown RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 GNA14O95837 355 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 C9P02748 559 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 MAN1A1P33908 653 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 KRT9P35527 623 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 ACTR1BP42025 376 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 ACTR1AP61163 376 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 C11orf91Q3C1V1 193 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 PYCR3Q53H96 274 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 STRADAQ7RTN6 431 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 KDELC2Q7Z4H8 507 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 HSD11B1LQ7Z5J1 315 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 SRRM1Q8IYB3 904 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms