RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CXCR5P32302 372 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 SPAM1P38567 509 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 POLD2P49005 469 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 GDF10P55107 478 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 LRP8Q14114 963 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 GSE1Q14687 1217 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 EFL1Q7Z2Z2 1120 aaKnown RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 TMPRSS12Q86WS5 348 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 SLC35F3Q8IY50 421 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 TAB3Q8N5C8 712 aaPredicted RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 KYQ8NBH2 561 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 GPR26Q8NDV2 337 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 MAPK15Q8TD08 544 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 COX14Q96I36 57 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 NAP1L3Q99457 506 aaPredicted RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 GORASP1Q9BQQ3 440 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 KCNF1Q9H3M0 494 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 DPEP2Q9H4A9 486 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 RMI1Q9H9A7 625 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 TRNAU1APQ9NX07 287 aaKnown RBP12.01□□□□□ -0.49
SRP54-206ENST00000555317 VPS18Q9P253 973 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 ZNHIT2Q9UHR6 403 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 PADI4Q9UM07 663 aa12.01□□□□□ -0.49
SRP54-206ENST00000555317 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
SRP54-206ENST00000555317 GLYATL1P3A0A0U1RQE8 302 aa12□□□□□ -0.49
SRP54-206ENST00000555317 ERI2A8K979 691 aaKnown RBP12□□□□□ -0.49
SRP54-206ENST00000555317 FADS2P1A8MWK0 482 aa12□□□□□ -0.49
SRP54-206ENST00000555317 USP12O75317 370 aa12□□□□□ -0.49
SRP54-206ENST00000555317 DKK1O94907 266 aa12□□□□□ -0.49
SRP54-206ENST00000555317 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
SRP54-206ENST00000555317 MYF5P13349 255 aa12□□□□□ -0.49
SRP54-206ENST00000555317 JUPP14923 745 aa12□□□□□ -0.49
SRP54-206ENST00000555317 LPOP22079 712 aaPredicted RBP12□□□□□ -0.49
SRP54-206ENST00000555317 ADRA1AP35348 466 aa12□□□□□ -0.49
SRP54-206ENST00000555317 FDFT1P37268 417 aa12□□□□□ -0.49
SRP54-206ENST00000555317 ADCY8P40145 1251 aa12□□□□□ -0.49
SRP54-206ENST00000555317 ITGA9Q13797 1035 aa12□□□□□ -0.49
SRP54-206ENST00000555317 GTF2H3Q13889 308 aa12□□□□□ -0.49
SRP54-206ENST00000555317 SPARCL1Q14515 664 aa12□□□□□ -0.49
SRP54-206ENST00000555317 TAF1AQ15573 450 aaPredicted RBP12□□□□□ -0.49
SRP54-206ENST00000555317 OASLQ15646 514 aaKnown RBP12□□□□□ -0.49
SRP54-206ENST00000555317 SMAD1Q15797 465 aaKnown RBP12□□□□□ -0.49
SRP54-206ENST00000555317 CCNG2Q16589 344 aa12□□□□□ -0.49
SRP54-206ENST00000555317 HES3Q5TGS1 186 aa12□□□□□ -0.49
SRP54-206ENST00000555317 KCTD16Q68DU8 428 aa12□□□□□ -0.49
SRP54-206ENST00000555317 SLC30A9Q6PML9 568 aa12□□□□□ -0.49
SRP54-206ENST00000555317 FAM151BQ6UXP7 276 aa12□□□□□ -0.49
SRP54-206ENST00000555317 RANBP10Q6VN20 620 aa12□□□□□ -0.49
SRP54-206ENST00000555317 PPP1R21Q6ZMI0 780 aa12□□□□□ -0.49
SRP54-206ENST00000555317 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
SRP54-206ENST00000555317 TMPRSS7Q7RTY8 843 aa12□□□□□ -0.49
SRP54-206ENST00000555317 LINC00523Q86TU6 105 aa12□□□□□ -0.49
SRP54-206ENST00000555317 TTC30BQ8N4P2 665 aa12□□□□□ -0.49
SRP54-206ENST00000555317 OR6C4Q8NGE1 309 aa12□□□□□ -0.49
SRP54-206ENST00000555317 GLYATL1Q969I3 302 aa12□□□□□ -0.49
SRP54-206ENST00000555317 EID2BQ96D98 161 aa12□□□□□ -0.49
SRP54-206ENST00000555317 RTP4Q96DX8 246 aa12□□□□□ -0.49
SRP54-206ENST00000555317 PBKQ96KB5 322 aa12□□□□□ -0.49
SRP54-206ENST00000555317 TTC25Q96NG3 672 aa12□□□□□ -0.49
SRP54-206ENST00000555317 ZCCHC2Q9C0B9 1178 aaKnown RBP12□□□□□ -0.49
SRP54-206ENST00000555317 OR2AG1Q9H205 316 aa12□□□□□ -0.49
SRP54-206ENST00000555317 SYNDIG1Q9H7V2 258 aa12□□□□□ -0.49
SRP54-206ENST00000555317 PAK5Q9P286 719 aa12□□□□□ -0.49
SRP54-206ENST00000555317 MSRB2Q9Y3D2 182 aa12□□□□□ -0.49
SRP54-206ENST00000555317 ACACAQ13085 2346 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 GOLGA6L10A0A0M3HER8 536 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 GPR89AB7ZAQ6 455 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 BUD23O43709 281 aaKnown RBP11.99□□□□□ -0.49
SRP54-206ENST00000555317 METTL18O95568 372 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 AP2A1O95782 977 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 GPR89BP0CG08 455 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 ACTR1BP42025 376 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 ACTR1AP61163 376 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 CTBSQ01459 385 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 CCDC173Q0VFZ6 552 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 OLIG2Q13516 323 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 SEPT6Q14141 434 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 GUSBP11Q6P575 273 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 C4orf22Q6V702 233 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 REXO1L1PQ8IX06 675 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 SLC35F6Q8N357 371 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 PDCD7Q8N8D1 485 aaKnown RBP11.99□□□□□ -0.49
SRP54-206ENST00000555317 DNAAF3Q8N9W5 541 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 BRSK1Q8TDC3 778 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 GPBAR1Q8TDU6 330 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 ZDHHC1Q8WTX9 485 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 SCARF2Q96GP6 870 aaPredicted RBP11.99□□□□□ -0.49
SRP54-206ENST00000555317 WDR24Q96S15 920 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 ARFGAP3Q9NP61 516 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 IL17CQ9P0M4 197 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 TAAR2Q9P1P5 351 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 CNOT6Q9ULM6 557 aaKnown RBP11.99□□□□□ -0.49
SRP54-206ENST00000555317 WASF3Q9UPY6 502 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 ARL5AQ9Y689 179 aa11.99□□□□□ -0.49
SRP54-206ENST00000555317 UNC13CQ8NB66 2214 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 LY6G6EA0A0G2JKS1 128 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 EME2A4GXA9 379 aaPredicted RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 FAM149AA5PLN7 773 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 PGRMC1O00264 195 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms