RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 Q0VFX4 171 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAGE1Q13065 139 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 GAGE4Q13068 117 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 PRPF4BQ13523 1007 aaKnown RBP5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 CTF1Q16619 201 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 DUS1LQ6P1R4 473 aaKnown RBP5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 POMGNT2Q8NAT1 580 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 AVL9Q8NBF6 648 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 MCUQ8NE86 351 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 WFIKKN2Q8TEU8 576 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 APBB2Q92870 758 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 ORAI1Q96D31 301 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 MYO6Q9UM54 1294 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 MAGED1Q9Y5V3 778 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 FAM169AQ9Y6X4 670 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 ARHGEF40Q8TER5 1519 aa5.41□□□□□ -1.54
CKS1BP1-201ENST00000555221 A0A1W2PR77 199 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 CPED1A4D0V7 1026 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 MYMKA6NI61 221 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 EIF4E1BA6NMX2 242 aaKnown RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 HS3ST1O14792 307 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 ADAM20O43506 726 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 PLRG1O43660 514 aaKnown RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 MMP9P14780 707 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 BAATQ14032 418 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 DECR1Q16698 335 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 TMEM266Q2M3C6 531 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 KRBA2Q6ZNG9 492 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 CCDC190Q86UF4 302 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 FOXRED2Q8IWF2 684 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 MINDY1Q8N5J2 469 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 HM13Q8TCT9 377 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 FAM216AQ8WUB2 273 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 SMG7Q92540 1137 aaKnown RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 TAAR8Q969N4 342 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 CEP295NLQ96MC4 621 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 ZNF48Q96MX3 618 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 DACH2Q96NX9 599 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 FCRL4Q96PJ5 515 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 PAFAH2Q99487 392 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 EBF3Q9H4W6 596 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 PAG1Q9NWQ8 432 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 NFKBIL1Q9UBC1 381 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 TINAGQ9UJW2 476 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 PADI1Q9ULC6 663 aa5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 PPIEQ9UNP9 301 aaKnown RBP5.4□□□□□ -1.54
CKS1BP1-201ENST00000555221 A0A0U1RQJ8 604 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 hDV102S1A0JD36 115 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 KCNJ13O60928 360 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 GLUD1P00367 558 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 TRIM21P19474 475 aaKnown RBP5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 GLUD2P49448 558 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 LIG4P49917 911 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 ARSEP51690 589 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 CLCNKAP51800 687 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 CXCL9Q07325 125 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 CDC16Q13042 620 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 TNFAIP1Q13829 316 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 RASA2Q15283 850 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 ATP13A5Q4VNC0 1218 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 FAM69BQ5VUD6 431 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 TMEM198Q66K66 360 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 BEST3Q8N1M1 668 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 PCDH20Q8N6Y1 951 aaKnown RBP5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 CCDC191Q8NCU4 936 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 ADAMTS14Q8WXS8 1223 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 WASF1Q92558 559 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 RND1Q92730 232 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 MTBPQ96DY7 904 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 GRAMD2BQ96HH9 432 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 GCNAQ96QF7 691 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 SEBOXQ9HB31 216 aaPredicted RBP5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 TAB2Q9NYJ8 693 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 DNAJB4Q9UDY4 337 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 CFDP1Q9UEE9 299 aaPredicted RBP5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 DBNLQ9UJU6 430 aaKnown RBP5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 PLAGL1Q9UM63 463 aa5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.39□□□□□ -1.55
CKS1BP1-201ENST00000555221 LNP1A1A4G5 178 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 FAM90A10PA6NDY2 464 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 CD8B2A6NJW9 211 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 A6NL46 340 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 SOCS6O14544 535 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 ADAMDEC1O15204 470 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 DKC1O60832 514 aaKnown RBP eCLIP5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 OAZ2O95190 189 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 GH2P01242 217 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 TPOP07202 933 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 IGHV4-30-4P0DP06 118 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 ARRB2P32121 409 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 MMP14P50281 582 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 TAS2R38P59533 333 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 CRYZQ08257 329 aaKnown RBP5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 MYLK3Q32MK0 819 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 FJX1Q86VR8 437 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 NEXN-AS1Q8NBZ9 246 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 KCTD6Q8NC69 237 aa5.38□□□□□ -1.55
CKS1BP1-201ENST00000555221 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms