RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CYP2A6P11509 494 aaPredicted RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 CLCN5P51795 746 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 MAGOHP61326 146 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 E2F5Q15329 346 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 ZNF284Q2VY69 593 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 KHDC1Q4VXA5 237 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 TMEM259Q4ZIN3 620 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 ZRANB3Q5FWF4 1079 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 TNFAIP8L3Q5GJ75 292 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 ERAP2Q6P179 960 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 AFTPHQ6ULP2 937 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 SRRM1Q8IYB3 904 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 C4orf33Q8N1A6 199 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 PEX13Q92968 403 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 PGM2Q96G03 612 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 SERAC1Q96JX3 654 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 NDNQ99608 321 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 CPNE1Q99829 537 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 GPR174Q9BXC1 333 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 CAB39LQ9H9S4 337 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 FBRSQ9HAH7 460 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 WSB2Q9NYS7 404 aaPredicted RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 FBXO5Q9UKT4 447 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 MTO1Q9Y2Z2 717 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 GLYATL1P3A0A0U1RQE8 302 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 SLC31A1O15431 190 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 AP1G1O43747 822 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 OR1I1O60431 355 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 SRP72O76094 671 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 TOP3BO95985 862 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 IGHV4-34P06331 123 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 ITGA2BP08514 1039 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 KRT15P19012 456 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 HPDP32754 393 aaPredicted RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 GP5P40197 560 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 GYS2P54840 703 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 PDE1BQ01064 536 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 LAMB3Q13751 1172 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 WSCD2Q2TBF2 565 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 ATP13A5Q4VNC0 1218 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 RBM20Q5T481 1227 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 USP30Q70CQ3 517 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 CMC1Q7Z7K0 106 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 TRIM74Q86UV6 250 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 EXOC3L1Q86VI1 746 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 ZC3HC1Q86WB0 502 aaKnown RBP10.7□□□□□ -0.7
TDP1-211ENST00000555178 TLCD1Q96CP7 247 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 DTD2Q96FN9 168 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 VPS39Q96JC1 886 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 RBBP8Q99708 897 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 FAM167BQ9BTA0 163 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 CRYL1Q9Y2S2 319 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 PI4KAP42356 2102 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 H0Y8X5 98 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 H7C0S8 307 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 MTX2O75431 263 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 SEMA4FO95754 770 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 S1PR4O95977 384 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 IGLV3-19P01714 112 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 SAT1P21673 171 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 SPAM1P38567 509 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 HADHAP40939 763 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 CLDN2P57739 230 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 CSTF1Q05048 431 aaKnown RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 ZBTB16Q05516 673 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 ELP6Q0PNE2 266 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 ZNF460Q14592 562 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 TTC31Q49AM3 519 aaPredicted RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 FASTKD1Q53R41 847 aaKnown RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 ARMC3Q5W041 872 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 ZNF449Q6P9G9 518 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 TRABD2AQ86V40 505 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 FBXL6Q8N531 539 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 DTWD2Q8NBA8 298 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 CXorf40AQ8TE69 158 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 FAM136AQ96C01 138 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 ORAI3Q9BRQ5 295 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 BOCQ9BWV1 1114 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 MED4Q9NPJ6 270 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 PRMT8Q9NR22 394 aaPredicted RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 TXNDC16Q9P2K2 825 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 ZNF180Q9UJW8 692 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 CNOT6Q9ULM6 557 aaKnown RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 FZD4Q9ULV1 537 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 PCYT1BQ9Y5K3 369 aaPredicted RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 ADAMTS9Q9P2N4 1935 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 ANKRD12Q6UB98 2062 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 TMEM131Q92545 1883 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 LZTS3O60299 673 aaPredicted RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 ALDOAP04075 364 aaKnown RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 ZNF30P17039 623 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 MAOBP27338 520 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 AVPR2P30518 371 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 LIMK2P53671 638 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 NFATC2Q13469 925 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 TPRG1LQ5T0D9 272 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 HENMT1Q5T8I9 393 aaKnown RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 TAS2R42Q7RTR8 314 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms