RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TIMM44O43615 452 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 DNAJC6O75061 913 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 H2AFYO75367 372 aaKnown RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 USP1O94782 785 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 CYBBP04839 570 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 APOA4P06727 396 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 C1SP09871 688 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 ERCC2P18074 760 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 GLDCP23378 1020 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 PSMB4P28070 264 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 SERPINB8P50452 374 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 ARFIP2P53365 341 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 CSE1LP55060 971 aaKnown RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 TMPRSS3P57727 454 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 RPS14P62263 151 aaKnown RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 INSM1Q01101 510 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 ZBTB16Q05516 673 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 BNIP3Q12983 259 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 CAMK2GQ13555 558 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 TIGD7Q6NT04 549 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 ASRGL1Q7L266 308 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 BHLHA9Q7RTU4 235 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 CCDC117Q8IWD4 279 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 PPP1R14CQ8TAE6 165 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 PTCD2Q8WV60 388 aaKnown RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 HIC2Q96JB3 615 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 CIPCQ9C0C6 399 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 OSBPL2Q9H1P3 480 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 MYLK2Q9H1R3 596 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 NPHS2Q9NP85 383 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 SLCO1B3Q9NPD5 702 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 PCMTD2Q9NV79 361 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 KCNK4Q9NYG8 393 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 SEPT10Q9P0V9 454 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 SIRPGQ9P1W8 387 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 DCDC2Q9UHG0 476 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 LNPEPQ9UIQ6 1025 aa11.14□□□□□ -0.63
SHMT2-216ENST00000554975 AGO1Q9UL18 857 aaKnown RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 HBS1LQ9Y450 684 aaKnown RBP11.14□□□□□ -0.63
SHMT2-216ENST00000554975 LRRK2Q5S007 2527 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SYNJ2BP-COX16A0A087WUM0 186 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NPC1O15118 1278 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 CCDC22O60826 627 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 MAP3K6O95382 1288 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 C7P10643 843 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SLC2A3P11169 496 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 GRK2P25098 689 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NPY2RP49146 381 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 C21orf59P57076 290 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 TMPRSS15P98073 1019 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NRG1Q02297 640 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-216ENST00000554975 UGP2Q16851 508 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 GRTP1Q5TC63 336 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 KIAA1614Q5VZ46 1190 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SERPINA13PQ6UXR4 307 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 PACS1Q6VY07 963 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SH2D5Q6ZV89 423 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 PID1Q7Z2X4 250 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 TBC1D1Q86TI0 1168 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NUDCD3Q8IVD9 361 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NDUFAF2Q8N183 169 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 ATPAF2Q8N5M1 289 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 DCBLD1Q8N8Z6 715 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
SHMT2-216ENST00000554975 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 DDI1Q8WTU0 396 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 CYB5D2Q8WUJ1 264 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 UCMAQ8WVF2 138 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 ISL2Q96A47 359 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 CERS2Q96G23 380 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SERAC1Q96JX3 654 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 TSNARE1Q96NA8 513 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SERPINB11Q96P15 392 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 TSGA13Q96PP4 275 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 HAPLN3Q96S86 360 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 IL22Q9GZX6 179 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 BTBD1Q9H0C5 482 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 WDCPQ9H6R7 721 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NOD2Q9HC29 1040 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 COX16Q9P0S2 106 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SLC17A7Q9P2U7 560 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 SERGEFQ9UGK8 458 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 CLCA2Q9UQC9 943 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
SHMT2-216ENST00000554975 RELNP78509 3460 aa11.13□□□□□ -0.63
SHMT2-216ENST00000554975 NBASA2RRP1 2371 aa11.12□□□□□ -0.63
SHMT2-216ENST00000554975 RP1P56715 2156 aa11.12□□□□□ -0.63
SHMT2-216ENST00000554975 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
SHMT2-216ENST00000554975 A0A1W2PR77 199 aa11.12□□□□□ -0.63
SHMT2-216ENST00000554975 IRAK2O43187 625 aa11.12□□□□□ -0.63
SHMT2-216ENST00000554975 DFNA5O60443 496 aa11.12□□□□□ -0.63
SHMT2-216ENST00000554975 AVILO75366 819 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms