RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 VILLO15195 856 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 VAPBO95292 243 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 KELP23276 732 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 ARCN1P48444 511 aaKnown RBP16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 FASTKD3Q14CZ7 662 aaKnown RBP16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 ATP13A5Q4VNC0 1218 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 AARS2Q5JTZ9 985 aaKnown RBP16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 LYPLAL1Q5VWZ2 237 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 ZNF449Q6P9G9 518 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 CERS6Q6ZMG9 384 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 UNC5AQ6ZN44 842 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 ANKMY2Q8IV38 441 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 PALM2Q8IXS6 379 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 CALML6Q8TD86 181 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 GLYATL1Q969I3 302 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 HIC2Q96JB3 615 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 TTC25Q96NG3 672 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 FCRL3Q96P31 734 aaPredicted RBP16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 AGAP2Q99490 1192 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 TTC1Q99614 292 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 MYOCQ99972 504 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 APOOQ9BUR5 198 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 ASB8Q9H765 288 aa16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 V9GYY5 206 aaPredicted RBP16.33■□□□□ 0.2
SPTLC2-203ENST00000554901 GON4LQ3T8J9 2241 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 FADS2P1A8MWK0 482 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 CACNB4O00305 520 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 GOT2P00505 430 aaKnown RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 MYCLP1P12525 358 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 ARNTP27540 789 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 HTR1BP28222 390 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 FOXN2P32314 431 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 PPARGP37231 505 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 CLDN2P57739 230 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 KIAA1024LP59773 190 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 CDK3Q00526 305 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 PTK2BQ14289 1009 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 LDLRAP1Q5SW96 308 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 CES3Q6UWW8 571 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 HEATR4Q86WZ0 1026 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 PHYKPLQ8IUZ5 450 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 PELI3Q8N2H9 469 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 SUMF1Q8NBK3 374 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 GPR150Q8NGU9 434 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 GSDMBQ8TAX9 411 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 HEXDCQ8WVB3 486 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 PIGKQ92643 395 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 KLHDC7BQ96G42 594 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 COX14Q96I36 57 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 SUDS3Q9H7L9 328 aaPredicted RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 RAB21Q9UL25 225 aa16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 CNOT6Q9ULM6 557 aaKnown RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 FNDC3AQ9Y2H6 1198 aaKnown RBP16.32■□□□□ 0.2
SPTLC2-203ENST00000554901 TNRC6BQ9UPQ9 1833 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 WDFY4Q6ZS81 3184 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 GPR89AB7ZAQ6 455 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 CCL22O00626 93 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 RETP07949 1114 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 GPR89BP0CG08 455 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 THEGLP0DJG4 465 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 THOP1P52888 689 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 VSNL1P62760 191 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 NFATC4Q14934 902 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 DUOXA1Q1HG43 343 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 FASTKD1Q53R41 847 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 HP1BP3Q5SSJ5 553 aaPredicted RBP16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 MRNIPQ6NTE8 343 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 Q6ZSR6 202 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 PTAR1Q7Z6K3 402 aaPredicted RBP16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 NXPE1Q8N323 547 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 DDHD1Q8NEL9 900 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 FUBP1Q96AE4 644 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 CFAP36Q96G28 342 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 TCF12Q99081 682 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 TRIM56Q9BRZ2 755 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 PLAC1Q9HBJ0 212 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 CATSPERZQ9NTU4 200 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 CRLS1Q9UJA2 301 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
SPTLC2-203ENST00000554901 H0Y8X5 98 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 TLR4O00206 839 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 TNFRSF10CO14798 259 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 PFDN6O15212 129 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 CD3EAPO15446 510 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 SLC25A14O95258 325 aaPredicted RBP16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 TTPAP49638 278 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 THOC5Q13769 683 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 ZRANB3Q5FWF4 1079 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 NEPROQ6NW34 567 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 MACC1Q6ZN28 852 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 SDCCAG8Q86SQ7 713 aaPredicted RBP16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 CERS2Q96G23 380 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 FAM167BQ9BTA0 163 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 ZCCHC2Q9C0B9 1178 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 TRIM39Q9HCM9 518 aa16.3■□□□□ 0.2
SPTLC2-203ENST00000554901 C20orf96Q9NUD7 363 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms