RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 MICAL3Q7RTP6 2002 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 POLNQ7Z5Q5 900 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 PHLDB2Q86SQ0 1253 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 GSPT2Q8IYD1 628 aaKnown RBP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 FUKQ8N0W3 1084 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 CRYBG2Q8N1P7 616 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 MREGQ8N565 214 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 Q8NA96 180 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 TMEM171Q8WVE6 324 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 SLCO2A1Q92959 643 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 COG8Q96MW5 612 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 KCNC2Q96PR1 638 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 TRAPPC9Q96Q05 1148 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 PPP1R10Q96QC0 940 aaKnown RBP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 APOL6Q9BWW8 343 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 REXO4Q9GZR2 422 aaKnown RBP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 DNAI2Q9GZS0 605 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 RAB17Q9H0T7 212 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 LRRC19Q9H756 370 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 ERVK-5Q9HDB9 667 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 FSCN3Q9NQT6 498 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 HOMER3Q9NSC5 361 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 SLC38A7Q9NVC3 462 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 TSPAN16Q9UKR8 245 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 NDRG4Q9ULP0 352 aaKnown RBP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 UTP11Q9Y3A2 253 aaKnown RBP4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 SQORQ9Y6N5 450 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 MYO16Q9Y6X6 1858 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 VWA8A3KMH1 1905 aa4.84□□□□□ -1.63
PPP4R3A-204ENST00000554574 SCN5AQ14524 2016 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 FNDC1Q4ZHG4 1894 aaPredicted RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 A0A1B0GTW7 788 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 A6NLC8 198 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 PRSS47A8MTI9 375 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 F8VP50 259 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 AGPSO00116 658 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 TOR1BO14657 336 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 TTI1O43156 1089 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 HOXC11O43248 304 aaPredicted RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 LAMTOR5O43504 91 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 NUAK1O60285 661 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 CCNT2O60583 730 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ZNF623O75123 536 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ERBB2P04626 1255 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RFC1P35251 1148 aaPredicted RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 THPOP40225 353 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 CETN2P41208 172 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 TNNT3P45378 269 aaPredicted RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RXRGP48443 463 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ACLYP53396 1101 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RABGGTBP53611 331 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 SNX16P57768 344 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 TAS2R40P59535 323 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 OGDHQ02218 1023 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 FHL3Q13643 280 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ITGA7Q13683 1181 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 SMC1AQ14683 1233 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ZNF648Q5T619 568 aaPredicted RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ARHGAP40Q5TG30 622 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ARHGAP17Q68EM7 881 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 CCDC137Q6PK04 289 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 MRPL10Q7Z7H8 261 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ACOT1Q86TX2 421 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RCOR2Q8IZ40 523 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 C12orf29Q8N999 325 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 APPL2Q8NEU8 664 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 CD99L2Q8TCZ2 262 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RAET1EQ8TD07 263 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 IFT81Q8WYA0 676 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 MAGOHBQ96A72 148 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 MCRS1Q96EZ8 462 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RBM41Q96IZ5 413 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 MRPL45Q9BRJ2 306 aaKnown RBP4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 ERP44Q9BS26 406 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 PTDSS2Q9BVG9 487 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM129AQ9BZQ8 928 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 SYNCQ9H7C4 482 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 MED4Q9NPJ6 270 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM114A2Q9NRY5 505 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 DNAJB11Q9UBS4 358 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 RASAL2Q9UJF2 1139 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 PADI3Q9ULW8 664 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 HPCAL4Q9UM19 191 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 NFU1Q9UMS0 254 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 SLC30A1Q9Y6M5 507 aa4.84□□□□□ -1.64
PPP4R3A-204ENST00000554574 GREB1Q4ZG55 1949 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 A0A0U1RQF3 1178 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM90A18PA6NE21 464 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM90A16PA6NEW6 464 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 ARL5CA6NH57 179 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM90A9PA6NNJ1 464 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM90A5PA8MXJ8 464 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 A8MXQ7 604 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 GOLGA8SH3BPF8 625 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 HUS1O60921 280 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 LRCH4O75427 683 aa4.83□□□□□ -1.64
PPP4R3A-204ENST00000554574 ZFPL1O95159 310 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms