RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 KCTD16Q68DU8 428 aa28.2■■■□□ 2.1
PCNX1-206ENST00000554292 GLYATL1Q969I3 302 aa28.2■■■□□ 2.1
PCNX1-206ENST00000554292 SCARF2Q96GP6 870 aaPredicted RBP28.2■■■□□ 2.1
PCNX1-206ENST00000554292 VPS35Q96QK1 796 aa28.2■■■□□ 2.1
PCNX1-206ENST00000554292 CNOT6Q9ULM6 557 aaKnown RBP28.2■■■□□ 2.1
PCNX1-206ENST00000554292 SUFUQ9UMX1 484 aa28.2■■■□□ 2.1
PCNX1-206ENST00000554292 PCDHGA1Q9Y5H4 931 aa28.2■■■□□ 2.1
PCNX1-206ENST00000554292 ARL5AQ9Y689 179 aa28.2■■■□□ 2.1
PCNX1-206ENST00000554292 NCOR2Q9Y618 2525 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 ARHGEF17Q96PE2 2063 aaPredicted RBP28.19■■■□□ 2.1
PCNX1-206ENST00000554292 GLYATL1P3A0A0U1RQE8 302 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 MED19A0JLT2 244 aaPredicted RBP28.19■■■□□ 2.1
PCNX1-206ENST00000554292 SLC25A14O95258 325 aaPredicted RBP28.19■■■□□ 2.1
PCNX1-206ENST00000554292 GNPDA1P46926 289 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 RPIAP49247 311 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 CDH17Q12864 832 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 ILF3Q12906 894 aaKnown RBP eCLIP28.19■■■□□ 2.1
PCNX1-206ENST00000554292 ITGA9Q13797 1035 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 C6orf132Q5T0Z8 1188 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 PAPD7Q5XG87 772 aaKnown RBP28.19■■■□□ 2.1
PCNX1-206ENST00000554292 PPP1R21Q6ZMI0 780 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 GLIS1Q8NBF1 620 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 APOLD1Q96LR9 279 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 OR2M4Q96R27 311 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 GSDMCQ9BYG8 508 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 TMEM168Q9H0V1 697 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 RMI1Q9H9A7 625 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 IL26Q9NPH9 171 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 TMEM98Q9Y2Y6 226 aa28.19■■■□□ 2.1
PCNX1-206ENST00000554292 YY2O15391 372 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 BUD23O43709 281 aaKnown RBP28.18■■■□□ 2.1
PCNX1-206ENST00000554292 SUN1O94901 812 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 APRTP07741 180 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 ZSCAN5DPP0CG00 497 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 POLD2P49005 469 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 ILKQ13418 452 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 PEX6Q13608 980 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 NYAP1Q6ZVC0 841 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 TAF8Q7Z7C8 310 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 PRUNE1Q86TP1 453 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 GALNT13Q8IUC8 556 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 DNAAF3Q8N9W5 541 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 OR4K2Q8NGD2 314 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 SUDS3Q9H7L9 328 aaPredicted RBP28.18■■■□□ 2.1
PCNX1-206ENST00000554292 EIF2B3Q9NR50 452 aaKnown RBP28.18■■■□□ 2.1
PCNX1-206ENST00000554292 TOR4AQ9NXH8 423 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 APPL1Q9UKG1 709 aa28.18■■■□□ 2.1
PCNX1-206ENST00000554292 GPR89AB7ZAQ6 455 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 PHF2O75151 1096 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 RFPL3O75679 317 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 CELA2BP08218 269 aaPredicted RBP28.17■■■□□ 2.1
PCNX1-206ENST00000554292 GPR89BP0CG08 455 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 CKMT1AP12532 417 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 ACP1P24666 158 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 HADHAP40939 763 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 ACADVLP49748 655 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 BASP1P80723 227 aaKnown RBP28.17■■■□□ 2.1
PCNX1-206ENST00000554292 MSLNQ13421 630 aaPredicted RBP28.17■■■□□ 2.1
PCNX1-206ENST00000554292 CCDC137Q6PK04 289 aaKnown RBP28.17■■■□□ 2.1
PCNX1-206ENST00000554292 FAM151BQ6UXP7 276 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 SLCO6A1Q86UG4 719 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 GRK7Q8WTQ7 553 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 ADAMTS14Q8WXS8 1223 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 BOCQ9BWV1 1114 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 TRIM39Q9HCM9 518 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 SMARCAL1Q9NZC9 954 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 SAR1BQ9Y6B6 198 aa28.17■■■□□ 2.1
PCNX1-206ENST00000554292 OAS3Q9Y6K5 1087 aaKnown RBP28.17■■■□□ 2.1
PCNX1-206ENST00000554292 ZNF185O15231 689 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 COILP38432 576 aaPredicted RBP28.16■■■□□ 2.1
PCNX1-206ENST00000554292 FNTAP49354 379 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 FOXC1Q12948 553 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 DNAJC3Q13217 504 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 LAMB3Q13751 1172 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 LRP8Q14114 963 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 SEPT6Q14141 434 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 TCEA2Q15560 299 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 MARK2Q7KZI7 788 aaKnown RBP28.16■■■□□ 2.1
PCNX1-206ENST00000554292 OR52K1Q8NGK4 314 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 GPBAR1Q8TDU6 330 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 GPR34Q9UPC5 381 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 GPSM3Q9Y4H4 160 aa28.16■■■□□ 2.1
PCNX1-206ENST00000554292 AP3B1O00203 1094 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 DKK1O94907 266 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 PMLP29590 882 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 ADCY8P40145 1251 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 ZNF140P52738 457 aaPredicted RBP28.15■■■□□ 2.1
PCNX1-206ENST00000554292 NR0B2Q15466 257 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 ATP13A5Q4VNC0 1218 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 PYCR3Q53H96 274 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 CCDC157Q569K6 752 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 TTC27Q6P3X3 843 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 GDAP1Q8TB36 358 aa28.15■■■□□ 2.1
PCNX1-206ENST00000554292 ZCCHC2Q9C0B9 1178 aaKnown RBP28.15■■■□□ 2.1
PCNX1-206ENST00000554292 PLXNB3Q9ULL4 1909 aa28.14■■■□□ 2.1
PCNX1-206ENST00000554292 VEGFDO43915 354 aa28.14■■■□□ 2.1
PCNX1-206ENST00000554292 FUCA1P04066 466 aa28.14■■■□□ 2.1
PCNX1-206ENST00000554292 TPH1P17752 444 aa28.14■■■□□ 2.1
PCNX1-206ENST00000554292 CDK16Q00536 496 aa28.14■■■□□ 2.1
PCNX1-206ENST00000554292 POU6F1Q14863 301 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms