RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PTPRRQ15256 657 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 QPCTQ16769 361 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PHF19Q5T6S3 580 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 LRRC38Q5VT99 294 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PDPK2PQ6A1A2 396 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SLC9A4Q6AI14 798 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 DOK6Q6PKX4 331 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF574Q6ZN55 896 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 RFLNAQ6ZTI6 216 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF605Q86T29 641 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 JAMLQ86YT9 394 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 RHOT2Q8IXI1 618 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SFRP1Q8N474 314 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PLD5Q8N7P1 536 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 AVL9Q8NBF6 648 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 CCDC112Q8NEF3 446 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 CCHCR1Q8TD31 782 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 RAPGEF5Q92565 580 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ANP32BQ92688 251 aaKnown RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 USP7Q93009 1102 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SCAMP4Q969E2 229 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 TADA1Q96BN2 335 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SGF29Q96ES7 293 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 OLFM3Q96PB7 478 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 WDR24Q96S15 920 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 AGAP2Q99490 1192 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 HERPUD2Q9BSE4 406 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 MLPHQ9BV36 600 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 RIOK2Q9BVS4 552 aaKnown RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PACSIN1Q9BY11 444 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ADGRE3Q9BY15 652 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 DEF6Q9H4E7 631 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 FAM83DQ9H4H8 585 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 RDH14Q9HBH5 336 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SARS2Q9NP81 518 aaKnown RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 RAD18Q9NS91 495 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GOLGA6AQ9NYA3 693 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PKD2L2Q9NZM6 624 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 CD84Q9UIB8 345 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 INTUQ9ULD6 942 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 CNOT6Q9ULM6 557 aaKnown RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 BOD1L1Q8NFC6 3051 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ASH1LQ9NR48 2969 aaKnown RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 MYO18BQ8IUG5 2567 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 KIR2DS5A0A0G2JLQ3 304 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 A0A0G2JNG1 304 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 A0A0U1RQS6 177 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 LRRD1A4D1F6 860 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 A6NCN8 305 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 C3orf70A6NLC5 250 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 OR5K4A6NMS3 321 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 FADS2P1A8MWK0 482 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 B4E171 279 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 AKR1B15C9JRZ8 316 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 STMND1H3BQB6 276 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 KIR2DS3K7RE56 304 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 KCNK1O00180 336 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 APOL1O14791 398 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PPP1R12AO14974 1030 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PPM1DO15297 605 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 DUX1O43812 170 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 MAP3K6O95382 1288 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 JCHAINP01591 159 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PLA2G2AP14555 144 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CSF2RBP32927 897 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TSPAN7P41732 249 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CD86P42081 329 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 NR2C2P49116 596 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 GSDMDP57764 484 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 RAB15P59190 212 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ZBTB17Q13105 803 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 MESDQ14696 234 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 KIR2DS5Q14953 304 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TGIF1Q15583 401 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 AMZ1Q400G9 498 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 MANEAQ5SRI9 462 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 ZFYVE27Q5T4F4 411 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 KIAA1614Q5VZ46 1190 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TMEM71Q6P5X7 295 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 IYDQ6PHW0 289 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 WDR74Q6RFH5 385 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 USP53Q70EK8 1073 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TMC3Q7Z5M5 1100 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TRIM74Q86UV6 250 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CPNE8Q86YQ8 564 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CNTD1Q8N815 330 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CCNYQ8ND76 341 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 AGBL5Q8NDL9 886 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 LPCAT1Q8NF37 534 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 OR10G6Q8NH81 332 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 SLC35G2Q8TBE7 412 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 SLC37A2Q8TED4 501 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 PATE1Q8WXA2 126 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 SH3KBP1Q96B97 665 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 IMP4Q96G21 291 aaKnown RBP6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CCDC74BQ96LY2 380 aa6.55□□□□□ -1.36
SLIRP-203ENST00000554074 CCDC42Q96M95 316 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms