RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SPATA4Q8NEY3 305 aa8.82□□□□□ -1
TDP1-208ENST00000553989 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
TDP1-208ENST00000553989 ECHDC3Q96DC8 303 aa8.82□□□□□ -1
TDP1-208ENST00000553989 PBKQ96KB5 322 aa8.82□□□□□ -1
TDP1-208ENST00000553989 CCDC74BQ96LY2 380 aa8.82□□□□□ -1
TDP1-208ENST00000553989 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
TDP1-208ENST00000553989 OSBPL9Q96SU4 736 aa8.82□□□□□ -1
TDP1-208ENST00000553989 NUDT22Q9BRQ3 303 aa8.82□□□□□ -1
TDP1-208ENST00000553989 SNRNP25Q9BV90 132 aaKnown RBP8.82□□□□□ -1
TDP1-208ENST00000553989 ZWILCHQ9H900 591 aa8.82□□□□□ -1
TDP1-208ENST00000553989 STARD5Q9NSY2 213 aa8.82□□□□□ -1
TDP1-208ENST00000553989 SPATS2LQ9NUQ6 558 aaKnown RBP8.82□□□□□ -1
TDP1-208ENST00000553989 PARVAQ9NVD7 372 aa8.82□□□□□ -1
TDP1-208ENST00000553989 TAAR2Q9P1P5 351 aa8.82□□□□□ -1
TDP1-208ENST00000553989 INTUQ9ULD6 942 aa8.82□□□□□ -1
TDP1-208ENST00000553989 SUFUQ9UMX1 484 aa8.82□□□□□ -1
TDP1-208ENST00000553989 AHCTF1Q8WYP5 2266 aa8.82□□□□□ -1
TDP1-208ENST00000553989 A0A1W2PQ67 120 aa8.81□□□□□ -1
TDP1-208ENST00000553989 MACROD2A1Z1Q3 448 aa8.81□□□□□ -1
TDP1-208ENST00000553989 TTC24A2A3L6 582 aaPredicted RBP8.81□□□□□ -1
TDP1-208ENST00000553989 ERICH4A6NGS2 130 aa8.81□□□□□ -1
TDP1-208ENST00000553989 LRRC53A6NM62 1247 aa8.81□□□□□ -1
TDP1-208ENST00000553989 HGSO14964 777 aaPredicted RBP8.81□□□□□ -1
TDP1-208ENST00000553989 ECEL1O95672 775 aa8.81□□□□□ -1
TDP1-208ENST00000553989 FERP16591 822 aa8.81□□□□□ -1
TDP1-208ENST00000553989 MPSTP25325 297 aa8.81□□□□□ -1
TDP1-208ENST00000553989 VIPR1P32241 457 aa8.81□□□□□ -1
TDP1-208ENST00000553989 CSTF2P33240 577 aaKnown RBP eCLIP8.81□□□□□ -1
TDP1-208ENST00000553989 TRIM23P36406 574 aa8.81□□□□□ -1
TDP1-208ENST00000553989 ETV3P41162 512 aa8.81□□□□□ -1
TDP1-208ENST00000553989 ACTR1BP42025 376 aa8.81□□□□□ -1
TDP1-208ENST00000553989 TNNT3P45378 269 aaPredicted RBP8.81□□□□□ -1
TDP1-208ENST00000553989 LMAN1P49257 510 aa8.81□□□□□ -1
TDP1-208ENST00000553989 ACTR1AP61163 376 aa8.81□□□□□ -1
TDP1-208ENST00000553989 CDK3Q00526 305 aa8.81□□□□□ -1
TDP1-208ENST00000553989 B4GALNT1Q00973 533 aa8.81□□□□□ -1
TDP1-208ENST00000553989 NSUN2Q08J23 767 aaKnown RBP eCLIP8.81□□□□□ -1
TDP1-208ENST00000553989 CNGA3Q16281 694 aa8.81□□□□□ -1
TDP1-208ENST00000553989 SLC18A3Q16572 532 aa8.81□□□□□ -1
TDP1-208ENST00000553989 NKAIN2Q5VXU1 208 aa8.81□□□□□ -1
TDP1-208ENST00000553989 DMRTA1Q5VZB9 504 aa8.81□□□□□ -1
TDP1-208ENST00000553989 FAM129CQ86XR2 697 aa8.81□□□□□ -1
TDP1-208ENST00000553989 NRSN1Q8IZ57 195 aa8.81□□□□□ -1
TDP1-208ENST00000553989 PELI3Q8N2H9 469 aa8.81□□□□□ -1
TDP1-208ENST00000553989 NPWQ8N729 165 aa8.81□□□□□ -1
TDP1-208ENST00000553989 GPBAR1Q8TDU6 330 aa8.81□□□□□ -1
TDP1-208ENST00000553989 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
TDP1-208ENST00000553989 AHCYL2Q96HN2 611 aaKnown RBP8.81□□□□□ -1
TDP1-208ENST00000553989 TAAR9Q96RI9 348 aa8.81□□□□□ -1
TDP1-208ENST00000553989 PEBP4Q96S96 227 aa8.81□□□□□ -1
TDP1-208ENST00000553989 CDH19Q9H159 772 aa8.81□□□□□ -1
TDP1-208ENST00000553989 SLC25A18Q9H1K4 315 aa8.81□□□□□ -1
TDP1-208ENST00000553989 KCTD5Q9NXV2 234 aa8.81□□□□□ -1
TDP1-208ENST00000553989 KCNK4Q9NYG8 393 aa8.81□□□□□ -1
TDP1-208ENST00000553989 TAS2R14Q9NYV8 317 aa8.81□□□□□ -1
TDP1-208ENST00000553989 TRIM10Q9UDY6 481 aa8.81□□□□□ -1
TDP1-208ENST00000553989 PCDHGC4Q9Y5F7 938 aa8.81□□□□□ -1
TDP1-208ENST00000553989 UNC13CQ8NB66 2214 aa8.81□□□□□ -1
TDP1-208ENST00000553989 IGHV5-10-1A0A0J9YXX1 117 aa8.8□□□□□ -1
TDP1-208ENST00000553989 H3BQF6 201 aa8.8□□□□□ -1
TDP1-208ENST00000553989 H3BRJ5 948 aa8.8□□□□□ -1
TDP1-208ENST00000553989 TRAFD1O14545 582 aaPredicted RBP8.8□□□□□ -1
TDP1-208ENST00000553989 TERTO14746 1132 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 SUV39H1O43463 412 aa8.8□□□□□ -1
TDP1-208ENST00000553989 B4GAT1O43505 415 aa8.8□□□□□ -1
TDP1-208ENST00000553989 SOCS5O75159 536 aa8.8□□□□□ -1
TDP1-208ENST00000553989 HEXIM1O94992 359 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 FGF1P05230 155 aa8.8□□□□□ -1
TDP1-208ENST00000553989 CEACAM5P06731 702 aa8.8□□□□□ -1
TDP1-208ENST00000553989 GM2AP17900 193 aa8.8□□□□□ -1
TDP1-208ENST00000553989 WT1P19544 449 aaPredicted RBP8.8□□□□□ -1
TDP1-208ENST00000553989 MIPP30301 263 aa8.8□□□□□ -1
TDP1-208ENST00000553989 HSPA9P38646 679 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 ARL4AP40617 200 aa8.8□□□□□ -1
TDP1-208ENST00000553989 NOP2P46087 812 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 GPR1P46091 355 aa8.8□□□□□ -1
TDP1-208ENST00000553989 NAP1L1P55209 391 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 MAXP61244 160 aa8.8□□□□□ -1
TDP1-208ENST00000553989 CTBSQ01459 385 aa8.8□□□□□ -1
TDP1-208ENST00000553989 SLC10A7Q0GE19 358 aa8.8□□□□□ -1
TDP1-208ENST00000553989 MAMLD1Q13495 774 aa8.8□□□□□ -1
TDP1-208ENST00000553989 ASIC2Q16515 512 aa8.8□□□□□ -1
TDP1-208ENST00000553989 PPP2R5EQ16537 467 aa8.8□□□□□ -1
TDP1-208ENST00000553989 CLPPQ16740 277 aaPredicted RBP8.8□□□□□ -1
TDP1-208ENST00000553989 SNAP47Q5SQN1 464 aa8.8□□□□□ -1
TDP1-208ENST00000553989 BORAQ6PGQ7 559 aa8.8□□□□□ -1
TDP1-208ENST00000553989 USP45Q70EL2 814 aa8.8□□□□□ -1
TDP1-208ENST00000553989 MARK2Q7KZI7 788 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 HSD11B1LQ7Z5J1 315 aa8.8□□□□□ -1
TDP1-208ENST00000553989 DTX1Q86Y01 620 aa8.8□□□□□ -1
TDP1-208ENST00000553989 ARHGAP12Q8IWW6 846 aa8.8□□□□□ -1
TDP1-208ENST00000553989 NDUFAF2Q8N183 169 aa8.8□□□□□ -1
TDP1-208ENST00000553989 ATPAF2Q8N5M1 289 aa8.8□□□□□ -1
TDP1-208ENST00000553989 LZTR1Q8N653 840 aa8.8□□□□□ -1
TDP1-208ENST00000553989 AGBL5Q8NDL9 886 aa8.8□□□□□ -1
TDP1-208ENST00000553989 AENQ8WTP8 325 aaKnown RBP8.8□□□□□ -1
TDP1-208ENST00000553989 PATE1Q8WXA2 126 aa8.8□□□□□ -1
TDP1-208ENST00000553989 HTR3CQ8WXA8 447 aa8.8□□□□□ -1
TDP1-208ENST00000553989 ART4Q93070 314 aa8.8□□□□□ -1
TDP1-208ENST00000553989 CAVIN3Q969G5 261 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms